RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 FA2HQ7L5A8 372 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 WDR5BQ86VZ2 330 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 TSTD1Q8NFU3 115 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR13G1Q8NGZ3 307 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 KCNS1Q96KK3 526 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 STRADBQ9C0K7 418 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 S1PR5Q9H228 398 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 SH3BGRL3Q9H299 93 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF286AQ9HBT8 521 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 ELOVL5Q9NYP7 299 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 LRIT1Q9P2V4 623 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 RBPJLQ9UBG7 517 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 COPS7AQ9UBW8 275 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 TAC3Q9UHF0 121 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 RCL1Q9Y2P8 373 aaKnown RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 Q9Y3F1 56 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 RHBDD3Q9Y3P4 386 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR1A2Q9Y585 309 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPS18BQ9Y676 258 aaKnown RBP4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 TTC3P53804 2025 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLXNA4Q9HCM2 1894 aa4.9□□□□□ -1.63
VTI1BP4-201ENST00000427516 NUP214P35658 2090 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TRAV9-2A0A087WT02 112 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 A0A1B0GV50 99 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 DPRXA6NFQ7 191 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SERINC4A6NH21 518 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF891A8MT65 544 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 GRXCR1A8MXD5 290 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 G3V4G9 280 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 H3BMH7 237 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 MPPED1O15442 326 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CD5LO43866 347 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 LDB3O75112 727 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF737O75373 536 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 RAD51DO75771 328 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 NDUFB8O95169 186 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 EOMESO95936 686 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 NUDT3O95989 172 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TIMP1P01033 207 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 NGFRP08138 427 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CYC1P08574 325 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC35E2P0CK97 266 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KITLGP21583 273 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 HNRNPA2B1P22626 353 aaKnown RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CST5P28325 142 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 GRPRP30550 384 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 NTSR1P30989 418 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PTGER4P35408 488 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CTRLP40313 264 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 REG1BP48304 166 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TFPI2P48307 235 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 COMPP49747 757 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PIGPP57054 158 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CTXN1P60606 82 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KRTDAPP60985 99 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 DCAF7P61962 342 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPS15AP62244 130 aaKnown RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 MRPS34P82930 218 aaKnown RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 HTD2P86397 168 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZIC1Q15915 447 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PRTGQ2VWP7 1150 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF776Q68DI1 518 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SP5Q6BEB4 398 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 COLCA1Q6ZS62 124 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 MOB1BQ7L9L4 216 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM123Q8N131 208 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAM58AQ8N1B3 248 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 MUC15Q8N387 334 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 DEFB125Q8N687 156 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 GVQW1Q8N7I0 195 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 STPG4Q8N801 248 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC16A11Q8NCK7 471 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR10W1Q8NGF6 305 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR4P4Q8NGL7 312 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR5C1Q8NGR4 320 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR11L1Q8NGX0 322 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 ZNF519Q8TB69 540 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PLPPR1Q8TBJ4 325 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 RTN4IP1Q8WWV3 396 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR5P3Q8WZ94 311 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TMEM186Q96B77 213 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 C10orf35Q96D05 121 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 TSSK2Q96PF2 358 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SMIM14Q96QK8 99 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR2V2Q96R30 315 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SIGMAR1Q99720 223 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 RSPO3Q9BXY4 272 aaPredicted RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 PARLQ9H300 379 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 CAPN10Q9HC96 672 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 MBNL1Q9NR56 388 aaKnown RBP4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KCNIP2Q9NS61 270 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC39A9Q9NUM3 307 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 FBXO34Q9NWN3 711 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAM206AQ9NX38 181 aa4.89□□□□□ -1.63
VTI1BP4-201ENST00000427516 KCNIP1Q9NZI2 227 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms