RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SEMA3DO95025 777 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TCRBP04435 133 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TYMSP04818 313 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 OCM2P0CE71 109 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 C8orf88P0DMB2 117 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC2A1P11166 492 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TAC1P20366 129 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ME2P23368 584 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 RPS12P25398 132 aaKnown RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TTPAP49638 278 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 MAGOHP61326 146 aaKnown RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 STX5Q13190 355 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 IL15RAQ13261 267 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ZNF235Q14590 738 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 PMVKQ15126 192 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 UAP1Q16222 522 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC25A35Q3KQZ1 300 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 GUSBP11Q6P575 273 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 FAM183BPQ6ZVS7 135 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 C10orf67Q8IYJ2 551 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SPANXA2-OT1Q8N9U9 137 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 OR5T1Q8NG75 326 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 HAVCR2Q8TDQ0 301 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TMEM159Q96B96 161 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 PPCDCQ96CD2 204 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 FXYD5Q96DB9 178 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 DGCR14Q96DF8 476 aaKnown RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 PACRGQ96M98 296 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 KCTD7Q96MP8 289 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 QKIQ96PU8 341 aaKnown RBP eCLIP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 RBP7Q96R05 134 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 OR4K3Q96R72 315 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ZNF649Q9BS31 505 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 FAAP24Q9BTP7 215 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 TMEM208Q9BTX3 173 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SUCNR1Q9BXA5 334 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ARL6Q9H0F7 186 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ASB7Q9H672 318 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 CA10Q9NS85 328 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 DNAJC27Q9NZQ0 273 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 ALG5Q9Y673 324 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC22A7Q9Y694 548 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 BRCA1P38398 1863 aaKnown RBP1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 BTNL10A8MVZ5 291 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 EFCAB9A8MZ26 197 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 TMEM114B3SHH9 223 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 F5H5K5 113 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 H3BP45 60 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 M0R1X1 148 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 UPK1AO00322 258 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 CCRL2O00421 344 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 PDCD6O75340 191 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 NSA2O95478 260 aaKnown RBP1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 P0C880 135 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 HSD11B1P28845 292 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 IFNGR2P38484 337 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 ACOT2P49753 483 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 CXCR4P61073 352 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 RANP62826 216 aaKnown RBP1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 FAM3AP98173 230 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 LAMTOR4Q0VGL1 99 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 Q499Y3 187 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 PDZD11Q5EBL8 140 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 SPIN3Q5JUX0 258 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 THOC7Q6I9Y2 204 aaKnown RBP1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 OPN5Q6U736 354 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 ZNF101Q8IZC7 436 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 ZFP82Q8N141 532 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 TMEM256Q8N2U0 113 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 GATD1Q8NB37 220 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 OR2M7Q8NG81 312 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 GPR32P1Q8NGA4 272 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 OR4C13Q8NGP0 309 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 OR1P1Q8NH06 330 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 STOML3Q8TAV4 291 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 NELFBQ8WX92 580 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 HGDQ93099 445 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 RERGQ96A58 199 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 OTUB2Q96DC9 234 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 RILPQ96NA2 401 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 TBL1YQ9BQ87 522 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 SFXN3Q9BWM7 321 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 GGTLC1Q9BX51 225 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC22A4Q9H015 551 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 RAB22AQ9UL26 194 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 GUCA1BQ9UMX6 200 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 HES2Q9Y543 173 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 TRIP11Q15643 1979 aa1.95□□□□□ -2.1
HMGB1P49-201ENST00000418882 CACNA1DQ01668 2161 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 METTL15A6NJ78 407 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 EVPLLA8MZ36 301 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 TAAR5O14804 337 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 UBDO15205 165 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 PFDN6O15212 129 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 UGT2B11O75310 529 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 ZNF189O75820 626 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 CNMDO75829 334 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 CA2P00918 260 aa1.94□□□□□ -2.1
HMGB1P49-201ENST00000418882 CDK1P06493 297 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms