RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 LRRN3E7EW58 273 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 RFXANKO14593 260 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 DVL1O14640 695 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 CASKO14936 926 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ARPC1BO15143 372 aaKnown RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 SLC19A2O60779 497 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TRAPPC6AO75865 159 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TXNDC12O95881 172 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 MELTFP08582 738 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 IFI6P09912 130 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR12D1P0DN82 309 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 MGMTP16455 207 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 GGT1P19440 569 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 FGF7P21781 194 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 S100A2P29034 98 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 BDKRB2P30411 391 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 GGT2P36268 569 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 GAS1P54826 345 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 CDC42P60953 191 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 SELENOTP62341 195 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 EIF5AP63241 154 aaKnown RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 SLC10A1Q14973 349 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 JOSD1Q15040 202 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 RAB35Q15286 201 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 CD226Q15762 336 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 SSX1Q16384 188 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 EIPR1Q53HC9 387 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 PYDC2Q56P42 97 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 PAGE3Q5JUK9 113 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 HIST2H3PS2Q5TEC6 136 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 LEMD1Q68G75 181 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 FAM71F2Q6NXP2 309 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 C1orf94Q6P1W5 598 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 FAHD1Q6P587 224 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 KCTD18Q6PI47 426 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 GSG1LQ6UXU4 331 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF730Q6ZMV8 503 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF621Q6ZSS3 439 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 MSRB3Q8IXL7 192 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 DND1Q8IYX4 353 aaKnown RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 C10orf111Q8N326 155 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 RPRMLQ8N4K4 120 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF614Q8N883 585 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 UBAC2Q8NBM4 344 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ACBD4Q8NC06 268 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 SDR9C7Q8NEX9 313 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 BEST4Q8NFU0 473 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR4D6Q8NGJ1 314 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR4D5Q8NGN0 318 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR1J4Q8NGS1 313 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR2T35Q8NGX2 323 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR4C3Q8NH37 302 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 OR10A6Q8NH74 314 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 COQ8AQ8NI60 647 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 PIGXQ8TBF5 258 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 CCDC107Q8WV48 283 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 RNF138Q8WVD3 245 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM18Q96B42 140 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 NEURL3Q96EH8 262 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 DIRAS2Q96HU8 199 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ADGRG7Q96K78 797 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 YPEL4Q96NS1 127 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 S100A13Q99584 98 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TBL1XR1Q9BZK7 514 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 COMMD4Q9H0A8 199 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZDHHC11Q9H8X9 412 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 LPAR2Q9HBW0 351 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM100Q9NV29 134 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 C1orf123Q9NWV4 160 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 NDUFB11Q9NX14 153 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 CLEC5AQ9NY25 188 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 GNG12Q9UBI6 72 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 B4GALT7Q9UBV7 327 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF222Q9UK12 451 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 FLVCR2Q9UPI3 526 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 MEMO1Q9Y316 297 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 LSM2Q9Y333 95 aaKnown RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ETV7Q9Y603 341 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 EML6Q6ZMW3 1958 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF407Q9C0G0 2248 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 HIVEP3Q5T1R4 2406 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 NUP214P35658 2090 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-202ENST00000409915 POLEQ07864 2286 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 ESPL1Q14674 2120 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZGRF1Q86YA3 2104 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 MED12Q93074 2177 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 HECTD1Q9ULT8 2610 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TRGV5A0A0B4J1U4 118 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 A0A1W2PQL4 384 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF724A8MTY0 619 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SNRPGP15A8MWD9 76 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 CCL24O00175 119 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 RHODO00212 210 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 HMGN4O00479 90 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZG16O60844 167 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 FZD7O75084 574 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NCR1O76036 304 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 PTHP01270 115 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms