RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SPEF1Q9Y4P9 236 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 DIDO1Q9BTC0 2240 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 SIRPB1O00241 398 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 CDIPTO14735 213 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 DEDDO75618 318 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 TK1P04183 234 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 GRPP07492 148 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 CD82P27701 267 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF573Q86YE8 665 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 WNT2BQ93097 391 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 ERGIC1Q969X5 290 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 PRRX2Q99811 253 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 OR51I2Q9H344 312 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 FBXL17Q9UF56 701 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF175Q9Y473 711 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 MPC1Q9Y5U8 109 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 HEATR1Q9H583 2144 aaKnown RBP13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 ASCL1P50553 236 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 SRSF3P84103 164 aaKnown RBP13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 SMCO1Q147U7 214 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 TBC1D26Q86UD7 250 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 SAXO1Q8IYX7 474 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 OR1J1Q8NGS3 322 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 GALNT14Q96FL9 552 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 TMEM231Q9H6L2 316 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 TUBD1Q9UJT1 453 aa13.61□□□□□ -0.23
CNKSR1-202ENST00000374253 C3orf85A0A1B0GTC6 90 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 KRBOX1C9JBD0 128 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 MPPED1O15442 326 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 HOXD4P09016 255 aaPredicted RBP13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 MPV17P39210 176 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 CEBPDP49716 269 aaPredicted RBP13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 TMEM33P57088 247 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 DPPA2Q7Z7J5 298 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 MRPL30Q8TCC3 161 aaKnown RBP13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 SYT3Q9BQG1 590 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF705EA8MWA4 302 aaPredicted RBP13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 TFF1P04155 84 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 KIR2DL2P43627 348 aaPredicted RBP13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 DEFA5Q01523 94 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 GABRA6Q16445 453 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 MPV17LQ2QL34 196 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 LDLRAD3Q86YD5 345 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF565Q8N9K5 539 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 SCCPDHQ8NBX0 429 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
CNKSR1-202ENST00000374253 PTPRBP23467 1997 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A10PA6NDY2 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A18PA6NE21 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A16PA6NEW6 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A20PA6NIJ5 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A8PA6NJQ4 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A7PA6NKC0 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 OR5B21A6NL26 309 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A22PA8MWA6 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A12PA8MX19 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A5PA8MXJ8 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A23PA8MXZ1 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC34A2O95436 690 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 IGHG3P01860 377 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A15PP0C7V4 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A13PP0C7W8 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A14PP0C7W9 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM90A24PP0C7X0 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 ID4P47928 161 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 PXDC1Q5TGL8 231 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 FBXW12Q6X9E4 464 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 KIRREL1Q96J84 757 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 ADAT1Q9BUB4 502 aaKnown RBP13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 SUCNR1Q9BXA5 334 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 OPA3Q9H6K4 179 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 TAF9BQ9HBM6 251 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 TINAGQ9UJW2 476 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 UBE2J1Q9Y385 318 aaPredicted RBP13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 TRAV17A0A0B4J275 112 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 A0A1B0GW55 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 MEX3AA1L020 520 aaKnown RBP13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 NKX2-6A6NCS4 301 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 TRDCB7Z8K6 153 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 TSPAN4O14817 238 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DEGS1O15121 323 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L2P0CJ85 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L3P0CJ86 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L4P0CJ87 422 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L5P0CJ88 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L6P0CJ89 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4L7P0CJ90 424 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 PSG7Q13046 419 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 LGI3Q8N145 548 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 USB1Q9BQ65 265 aaKnown RBP13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 HRH4Q9H3N8 390 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DNAJB11Q9UBS4 358 aa13.59□□□□□ -0.23
CNKSR1-202ENST00000374253 DUX4Q9UBX2 424 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms