RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 UBBP0CG47 229 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 IGHV1-8P0DP01 117 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 RANBP1P43487 201 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 ATAD3CQ5T2N8 411 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 FAM27D1Q5T7N8 215 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 LDLRAD3Q86YD5 345 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 PNKDQ8N490 385 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 NEK7Q8TDX7 302 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 DPCDQ9BVM2 203 aaPredicted RBP15.68■□□□□ 0.1
SYNE4-202ENST00000340477 IFT22Q9H7X7 185 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 H3BUI4 141 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 GEMIN2O14893 280 aaKnown RBP15.67■□□□□ 0.1
SYNE4-202ENST00000340477 GLIPR1P48060 266 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 DLX6P56179 175 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 EMX1Q04741 257 aaPredicted RBP15.67■□□□□ 0.1
SYNE4-202ENST00000340477 OR52W1Q6IF63 320 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 SUMF2Q8NBJ7 301 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 OR4D6Q8NGJ1 314 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 TNFRSF19Q9NS68 423 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 TAS2R3Q9NYW6 316 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 LRRC42Q9Y546 428 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 SESN1Q9Y6P5 492 aa15.67■□□□□ 0.1
SYNE4-202ENST00000340477 MEIKINA0A087WXM9 373 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 TRAV24A0A0B4J272 114 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 CRYBA1P05813 215 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
SYNE4-202ENST00000340477 PSMB9P28065 219 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 GLP1RP43220 463 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 HCP5Q6MZN7 132 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 TCF23Q7RTU1 214 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 LRRTM1Q86UE6 522 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 C11orf42Q8N5U0 333 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 ZNF565Q8N9K5 539 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 COQ2Q96H96 371 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 C1orf147Q96MC9 270 aaPredicted RBP15.66■□□□□ 0.1
SYNE4-202ENST00000340477 SELENOIQ9C0D9 397 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 ZNRD1Q9P1U0 126 aa15.66■□□□□ 0.1
SYNE4-202ENST00000340477 A0A1W2PP11 408 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A10PA6NDY2 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A18PA6NE21 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A16PA6NEW6 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A20PA6NIJ5 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A8PA6NJQ4 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A7PA6NKC0 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A22PA8MWA6 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A12PA8MX19 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A5PA8MXJ8 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A23PA8MXZ1 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 ARG1P05089 322 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A15PP0C7V4 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A13PP0C7W8 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A14PP0C7W9 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 FAM90A24PP0C7X0 464 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 MGMTP16455 207 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 DYNC1I2Q13409 638 aaKnown RBP15.65■□□□□ 0.1
SYNE4-202ENST00000340477 RBM39Q14498 530 aaKnown RBP15.65■□□□□ 0.1
SYNE4-202ENST00000340477 TAF9Q16594 264 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 C16orf87Q6PH81 154 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 ZNF773Q6PK81 442 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 C12orf54Q6X4T0 127 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 SPARTQ8N0X7 666 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 CORO2AQ92828 525 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 NCOR1P1Q9H4R4 102 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 PLGRKTQ9HBL7 147 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 NDUFB11Q9NX14 153 aa15.65■□□□□ 0.1
SYNE4-202ENST00000340477 TBL2Q9Y4P3 447 aaKnown RBP15.65■□□□□ 0.1
SYNE4-202ENST00000340477 ZNF729A6NN14 1252 aaPredicted RBP15.64■□□□□ 0.09
SYNE4-202ENST00000340477 CCRL2O00421 344 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 RRP9O43818 475 aaKnown RBP15.64■□□□□ 0.09
SYNE4-202ENST00000340477 MYL9P24844 172 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 HTR2CP28335 458 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 UBE2UQ5VVX9 321 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 HEPN1Q6WQI6 88 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 TMEM91Q6ZNR0 172 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 BEND2Q8NDZ0 799 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 OR6M1Q8NGM8 313 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 OR5R1Q8NH85 324 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 CLEC7AQ9BXN2 247 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 PPIL3Q9H2H8 161 aaKnown RBP15.64■□□□□ 0.09
SYNE4-202ENST00000340477 TMEM133Q9H2Q1 129 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 BANF2Q9H503 90 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 KIF25Q9UIL4 384 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 KIAA2026Q5HYC2 2103 aa15.64■□□□□ 0.09
SYNE4-202ENST00000340477 TMEM30CPA0ZSE6 113 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 MCRIP1C9JLW8 97 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 IGHV4-59P01825 116 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 CDK2P24941 298 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 IER3P46695 156 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 PSMD7P51665 324 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 GP2P55259 537 aaKnown RBP15.63■□□□□ 0.09
SYNE4-202ENST00000340477 FABP5Q01469 135 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 PAX5Q02548 391 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 FOXL1Q12952 345 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 KCTD21Q4G0X4 260 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 C1orf100Q5SVJ3 147 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 PRAMEF5Q5TYX0 476 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 LYPD6Q86Y78 171 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 OR11H6Q8NGC7 330 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 FAM46BQ96A09 425 aa15.63■□□□□ 0.09
SYNE4-202ENST00000340477 TMEM89A2RUT3 159 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms