RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SOX2P48431 317 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 QRFPP83859 136 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 C2orf76Q3KRA6 126 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 FAM78AQ5JUQ0 283 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 C16orf82Q7Z2V1 217 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 HMGN2P46Q86SG4 172 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PNKDQ8N490 385 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 OR2Z1Q8NG97 314 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PFN4Q8NHR9 129 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 STARD4Q96DR4 205 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 OR5B12Q96R08 314 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 NUDT9Q9BW91 350 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF703Q9H7S9 590 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 IL23AQ9NPF7 189 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 MBNL1Q9NR56 388 aaKnown RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PRR13Q9NZ81 148 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 MRM2Q9UI43 246 aaKnown RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 KIR2DS5A0A0G2JLQ3 304 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 A0A0G2JNG1 304 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 SERINC4A6NH21 518 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 KIR2DS3K7RE56 304 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 GPR137BO60478 399 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 S100GP29377 79 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 GPR6P46095 362 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 GALR1P47211 349 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 EMDP50402 254 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF133P52736 654 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 KIR2DS5Q14953 304 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 CST6Q15828 149 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF776Q68DI1 518 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 SGPP2Q8IWX5 399 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 KLHDC1Q8N7A1 406 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PLPP7Q8NBV4 271 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 CHST4Q8NCG5 386 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 OR2Y1Q8NGV0 311 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 MARCH1Q8TCQ1 289 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 FGGYQ96C11 551 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 RXFP3Q9NSD7 469 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 HIF1ANQ9NWT6 349 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 FRRS1LQ9P0K9 344 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 DEC1Q9P2X7 70 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 NAT8Q9UHE5 227 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 MMP17Q9ULZ9 603 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 TRAV8-7A0A075B6U6 113 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 IGLV3-32A0A0A0MS00 114 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 A0A0J9YY10 115 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 FEZF1A0PJY2 475 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 TAX1BP3O14907 124 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 TYMSP04818 313 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 GYPBP06028 91 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PF4V1P10720 104 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 HIST1H1CP16403 213 aaKnown RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 PTGER4P35408 488 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 NANOS3P60323 173 aaKnown RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 HERV-K104P63124 156 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 TSTA3Q13630 321 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-201ENST00000316433 ANKRD55Q3KP44 614 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 SLC25A53Q5H9E4 307 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 C9orf135Q5VTT2 229 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 WDR82Q6UXN9 313 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 LRRC69Q6ZNQ3 347 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 C5orf17Q8NAS9 161 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 OR5B3Q8NH48 314 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 CLDND2Q8NHS1 167 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 OTOSQ8NHW6 89 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 FAM3DQ96BQ1 224 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 C8orf44Q96CB5 159 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 ZG16BQ96DA0 208 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 BTF3L4Q96K17 158 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 APOOQ9BUR5 198 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 LPAR5Q9H1C0 372 aa5.78□□□□□ -1.48
ZNF540-201ENST00000316433 TNRC6BQ9UPQ9 1833 aaKnown RBP5.77□□□□□ -1.49
ZNF540-201ENST00000316433 FRG2CA6NGY1 282 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 OR2T8A6NH00 312 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 H0YIG0 161 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 RAB29O14966 203 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 BRI3O95415 125 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 BGLAPP02818 100 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 GDF1P27539 372 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 GCH1P30793 250 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 MLF1P58340 268 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 EXT1Q16394 746 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 ELOA3BQ3SY89 546 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 RAET1LQ5VY80 246 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 PLXDC2Q6UX71 529 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 OLIG3Q7RTU3 272 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM217Q8N7C4 229 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 ELOA3Q8NG57 546 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 OR5AU1Q8NGC0 362 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 OR1B1Q8NGR6 318 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 CYB5D2Q8WUJ1 264 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 DPF1Q92782 380 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM230Q96A57 120 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 ELSPBP1Q96BH3 223 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 C10orf35Q96D05 121 aa5.77□□□□□ -1.49
ZNF540-201ENST00000316433 ZMYND19Q96E35 227 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-201ENST00000316433 RBMXL1Q96E39 390 aaKnown RBP5.77□□□□□ -1.49
ZNF540-201ENST00000316433 FOXN4Q96NZ1 517 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms