RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MED9Q9NWA0 146 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 DNAJB11Q9UBS4 358 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 NPIPB11E5RHQ5 1161 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 K7ENP7 123 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 MLNRO43193 412 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 ZNF44P15621 663 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 DUSP1P28562 367 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 TDGF1P3P51864 188 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 SRPXP78539 464 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 NAAAQ02083 359 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 LIAT1Q6ZQX7 453 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 SCNM1Q9BWG6 230 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 PIGMQ9H3S5 423 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 PRR13Q9NZ81 148 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 TUBD1Q9UJT1 453 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 FAM186AA6NE01 2351 aa16.48■□□□□ 0.23
HOXC4-201ENST00000303406 GVINP1Q7Z2Y8 2422 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 LEUTXA8MZ59 168 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 C1QTNF9BB2RNN3 333 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 CDIPTO14735 213 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 SH2D1BO14796 132 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 TIMM8AO60220 97 aaPredicted RBP16.47■□□□□ 0.23
HOXC4-201ENST00000303406 HOXB5P09067 269 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 SCTP09683 121 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 LDLRAD3Q86YD5 345 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 ST8SIA2Q92186 375 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 PHYHIPLQ96FC7 376 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 USB1Q9BQ65 265 aaKnown RBP16.47■□□□□ 0.23
HOXC4-201ENST00000303406 MSRB2Q9Y3D2 182 aa16.47■□□□□ 0.23
HOXC4-201ENST00000303406 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
HOXC4-201ENST00000303406 H0YIZ8 118 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 H0YL77 283 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 SLC33A1O00400 549 aaPredicted RBP16.46■□□□□ 0.23
HOXC4-201ENST00000303406 HS3ST1O14792 307 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 NXPH2O95156 264 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 OR2H2O95918 312 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 OR5AC1P0C628 307 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 GLI4P10075 376 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 HERPUD1Q15011 391 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 TBR1Q16650 682 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 PAN3Q58A45 887 aaKnown RBP16.46■□□□□ 0.23
HOXC4-201ENST00000303406 LGI3Q8N145 548 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 OR5T2Q8NGG2 359 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 DCUN1D4Q92564 292 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 RDH5Q92781 318 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 MARVELD3Q96A59 401 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 ARPC5LQ9BPX5 153 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 TMEM165Q9HC07 324 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 GLS2Q9UI32 602 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 TINAGQ9UJW2 476 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 TP53TG5Q9Y2B4 290 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 SPEF1Q9Y4P9 236 aa16.46■□□□□ 0.23
HOXC4-201ENST00000303406 ZFHX2Q9C0A1 2572 aaPredicted RBP16.46■□□□□ 0.22
HOXC4-201ENST00000303406 MPTX1A8MV57 137 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 GPR31O00270 319 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 LMO1P25800 156 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 NUP62P37198 522 aaPredicted RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 GGNBP1Q5YKI7 109 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 RGS7BPQ6MZT1 257 aaPredicted RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF497Q6ZNH5 498 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 C11orf53Q8IXP5 236 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 S100PBPQ96BU1 408 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 MSI2Q96DH6 328 aaKnown RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 C18orf12Q96KH6 178 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 AQP10Q96PS8 301 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 ZFP57Q9NU63 452 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 FBXO9Q9UK97 447 aaPredicted RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 IGKV1-6A0A0C4DH72 117 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 HSPB6O14558 160 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 PRRG2O14669 202 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 RRASP10301 218 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 SPINK2P20155 84 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 GNRHRP30968 328 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 ATXN7L3Q14CW9 347 aaPredicted RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 IAH1Q2TAA2 248 aaPredicted RBP16.45■□□□□ 0.22
HOXC4-201ENST00000303406 PHLDA2Q53GA4 152 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 C6orf183Q5T699 404 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 PCSK4Q6UW60 755 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 RPRMLQ8N4K4 120 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF565Q8N9K5 539 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 STOML3Q8TAV4 291 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 PRR7Q8TB68 274 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 MUCL1Q96DR8 90 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 CNTNAP3BQ96NU0 1288 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 CNTNAP3Q9BZ76 1288 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 WIPI2Q9Y4P8 454 aa16.45■□□□□ 0.22
HOXC4-201ENST00000303406 ESPL1Q14674 2120 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 INTS1Q8N201 2190 aaKnown RBP16.44■□□□□ 0.22
HOXC4-201ENST00000303406 MPPED1O15442 326 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF205O95201 554 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 PTBP3O95758 552 aaKnown RBP16.44■□□□□ 0.22
HOXC4-201ENST00000303406 GRPP07492 148 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 WNT2P09544 360 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF250P15622 560 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 RAB32Q13637 225 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 IGFBP7Q16270 282 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 C20orf204Q6ZNR8 217 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 Q6ZR03 302 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 GLYATL2Q8WU03 294 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms