RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 RBPJQ06330 500 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR11H1Q8NG94 326 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR11H2Q8NH07 326 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR6X1Q8NH79 312 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RLN3Q8WXF3 142 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DIRC2Q96SL1 478 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 GPR132Q9UNW8 380 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF257Q9Y2Q1 563 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FCF1Q9Y324 198 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LOC107986453A0A1B0GWG9 222 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MYBPHLA2RUH7 354 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DHRS3O75911 302 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SFT2D2O95562 160 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 AMY1AP04745 511 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PMELP40967 661 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CLDN17P56750 224 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HERPUD1Q15011 391 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SYT9Q86SS6 491 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PLPP7Q8NBV4 271 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RAB1CQ92928 201 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MVB12AQ96EY5 273 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 A0A0J9YY10 115 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 C17orf51A8MQB3 221 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OPRK1P41145 380 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RPS15P62841 145 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CERKQ8TCT0 537 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HHIPQ96QV1 700 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 GMLQ99445 158 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 BOCQ9BWV1 1114 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CD8AP01732 235 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 AGAP20933 346 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CLDN12P56749 244 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RAC3P60763 192 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RHOGP84095 191 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 FBLN7Q53RD9 439 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PSRC1Q6PGN9 363 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ATOH7Q8N100 152 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TMED7-TICAM2A0A0A6YYA0 188 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR5B21A6NL26 309 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 C1QTNF9P0C862 333 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ESDP10768 282 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CD22P20273 847 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RPL27P61353 136 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF718Q3SXZ3 478 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CGB2Q6NT52 195 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TAS1R1Q7RTX1 841 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR10G7Q8NGN6 311 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 NPIPB6E9PJ23 425 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CTAG2O75638 210 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 EDN3P14138 238 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MAMSTRQ6ZN01 415 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 KIAA1671Q9BY89 1806 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 IGHV1-69-2A0A0G2JMI3 117 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 HOXD4P09016 255 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LIMS1P48059 325 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 HHEXQ03014 270 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 UBE2V1Q13404 147 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SNAI3Q3KNW1 292 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ABHD17BQ5VST6 288 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM211Q6ICI0 200 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CLDN23Q96B33 292 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 AKR7A3O95154 331 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 DCTDP32321 178 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 KIR3DL2P43630 455 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MVDP53602 400 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM258P61165 79 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 NUTF2P61970 127 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PRDX1Q06830 199 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 KLRB1Q12918 225 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 Q56UQ5 140 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CLECL1Q8IZS7 167 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR4P4Q8NGL7 312 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR10X1Q8NGY0 326 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 GAS2L1Q99501 681 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ST3GAL6Q9Y274 331 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 FAM57BQ71RH2 274 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 GDF7Q7Z4P5 450 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SCCPDHQ8NBX0 429 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF414Q96IQ9 312 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 A0A1W2PP11 408 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF716A6NP11 495 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LYZL6O75951 148 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CLEC2DQ9UHP7 191 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TRAV30A0A087WSZ9 112 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SERTM1A2A2V5 107 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms