RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 FAM90A7PA6NKC0 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A22PA8MWA6 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A12PA8MX19 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A5PA8MXJ8 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A23PA8MXZ1 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 HSD17B6O14756 317 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 CELA3BP08861 270 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A15PP0C7V4 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A13PP0C7W8 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A14PP0C7W9 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM90A24PP0C7X0 464 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 PMELP40967 661 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FBXW9Q5XUX1 488 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 EIF5AL1Q6IS14 154 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 SAXO1Q8IYX7 474 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 GAPTQ8N292 157 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 SUMF2Q8NBJ7 301 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 RHOFQ9HBH0 211 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 WFDC1Q9HC57 220 aa15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 FBXO9Q9UK97 447 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 TNRC6AQ8NDV7 1962 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-201ENST00000291842 IGKV1-6A0A0C4DH72 117 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 NKX2-6A6NCS4 301 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 JTBO76095 146 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 NHLH2Q02577 135 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 BCL2L2Q92843 193 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 USB1Q9BQ65 265 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 PLSCR2Q9NRY7 297 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 RCC2Q9P258 522 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 RCL1Q9Y2P8 373 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 UBE2J1Q9Y385 318 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 MED12LQ86YW9 2145 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 TNFSF12O43508 249 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 MUC1P15941 1255 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 SULT1A2P50226 295 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 GCNT2Q8N0V5 402 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 ZNF565Q8N9K5 539 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 UQCC1Q9NVA1 299 aa15.68■□□□□ 0.1
SHKBP1-201ENST00000291842 DSPP15924 2871 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 CDK2AP1O14519 115 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 WISP2O76076 250 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 ZNF806P0C7X5 589 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 MPV17LQ2QL34 196 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 SAT2Q96F10 170 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 CCL28Q9NRJ3 127 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 TTC28Q96AY4 2481 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 SLC33A1O00400 549 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 ST8SIA3O43173 380 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 GLAP06280 429 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 IL34Q6ZMJ4 242 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 Q6ZRG5 221 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 LDLRAD3Q86YD5 345 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 TMEM222Q9H0R3 208 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 LHX6Q9UPM6 363 aa15.67■□□□□ 0.1
SHKBP1-201ENST00000291842 CACNA1HO95180 2353 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 TRAV39A0A0B4J263 110 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 TRDCB7Z8K6 153 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 NXPH3O95157 252 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 GAPDHP04406 335 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 KCNJ3P48549 501 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 ERVS71-1P61550 626 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 ZNF695Q8IW36 515 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 SVBPQ8N300 66 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 DMBX1Q8NFW5 382 aa15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 EP300Q09472 2414 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-201ENST00000291842 TRAV24A0A0B4J272 114 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 NKX2-8O15522 239 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 CAV2P51636 162 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 GNG3P63215 75 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 OR4D5Q8NGN0 318 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 MRPL30Q8TCC3 161 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 TMED3Q9Y3Q3 217 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 MED19A0JLT2 244 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 GPR137BO60478 399 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 OR8U9P0C7N5 309 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 Q6ZS49 121 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 ZNF573Q86YE8 665 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 FAM58AQ8N1B3 248 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 UBAC2Q8NBM4 344 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 OR8U1Q8NH10 309 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 POM121Q96HA1 1249 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 MAGT1Q9H0U3 335 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 SH3BGRL3Q9H299 93 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 ATP23Q9Y6H3 246 aa15.65■□□□□ 0.1
SHKBP1-201ENST00000291842 LYZL6O75951 148 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 ZNF44P15621 663 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 FHITP49789 147 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 CCL11P51671 97 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 BTNL8Q6UX41 500 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 P4HA3Q7Z4N8 544 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 CBLN2Q8IUK8 224 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 MPC1Q9Y5U8 109 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 NUDT19A8MXV4 375 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 ATP6V1G2-DDX39BF2Z307 99 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 TOR1AO14656 332 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 SLC34A2O95436 690 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 CD80P33681 288 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 IDH3GP51553 393 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms