RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SHANK3Q9BYB0 1731 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 TOGARAM1Q9Y4F4 1720 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 NBPF3Q9H094 633 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 SLAIN2Q9P270 581 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 GOLGA8BA8MQT2 603 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 GPAA1O43292 621 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 METTL24Q5JXM2 366 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 FSIP1Q8NA03 581 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 ATG3Q9NT62 314 aa19.72■□□□□ 0.75
PHGDH-223ENST00000641597 XIRP1Q702N8 1843 aaKnown RBP19.71■□□□□ 0.75
PHGDH-223ENST00000641597 ITGA6P23229 1130 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 LDHAL6AQ6ZMR3 332 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 PLA2G4DQ86XP0 818 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 ZNF710Q8N1W2 664 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 TDRD7Q8NHU6 1098 aaKnown RBP19.71■□□□□ 0.75
PHGDH-223ENST00000641597 PCDHA7Q9UN72 937 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 MYO5AQ9Y4I1 1855 aaKnown RBP19.71■□□□□ 0.75
PHGDH-223ENST00000641597 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 UBE2Q2LH0YL09 131 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 HMGN5P82970 282 aaKnown RBP19.71■□□□□ 0.75
PHGDH-223ENST00000641597 IQCB1Q15051 598 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-223ENST00000641597 RIC1Q4ADV7 1423 aa19.71■□□□□ 0.75
PHGDH-223ENST00000641597 KIF28PB7ZC32 967 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 ZNF274Q96GC6 653 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 MYH15Q9Y2K3 1946 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 IMMTQ16891 758 aaKnown RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 MB21D2Q8IYB1 491 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 TTLL11Q8NHH1 800 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 CACTINQ8WUQ7 758 aaKnown RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 ZNF335Q9H4Z2 1342 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 PIH1D3Q9NQM4 214 aaKnown RBP19.7■□□□□ 0.74
PHGDH-223ENST00000641597 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
PHGDH-223ENST00000641597 IDH1O75874 414 aaKnown RBP19.69■□□□□ 0.74
PHGDH-223ENST00000641597 ZBTB38Q8NAP3 1195 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-223ENST00000641597 RIPOR2Q9Y4F9 1068 aa19.69■□□□□ 0.74
PHGDH-223ENST00000641597 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-223ENST00000641597 SLC9C2Q5TAH2 1124 aa19.69■□□□□ 0.74
PHGDH-223ENST00000641597 ZSCAN25Q6NSZ9 544 aa19.69■□□□□ 0.74
PHGDH-223ENST00000641597 TBC1D10CQ8IV04 446 aa19.69■□□□□ 0.74
PHGDH-223ENST00000641597 C16orf45Q96MC5 204 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-223ENST00000641597 CLIP2Q9UDT6 1046 aa19.69■□□□□ 0.74
PHGDH-223ENST00000641597 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-223ENST00000641597 CSF1RP07333 972 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 NDUFA8P51970 172 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 APPBP2Q92624 585 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-223ENST00000641597 ZBTB1Q9Y2K1 713 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 PAPPAQ13219 1627 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 PHKA1P46020 1223 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 CCDC73Q6ZRK6 1079 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 CNNM1Q9NRU3 951 aa19.68■□□□□ 0.74
PHGDH-223ENST00000641597 APPP05067 770 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 MYL10Q9BUA6 226 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 AKAP2Q9Y2D5 859 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 GOLGA6L6A8MZA4 724 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 RIOK3O14730 519 aaKnown RBP19.67■□□□□ 0.74
PHGDH-223ENST00000641597 KINO60870 393 aaKnown RBP19.67■□□□□ 0.74
PHGDH-223ENST00000641597 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 STK11IPQ8N1F8 1099 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 C8orf76Q96K31 380 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
PHGDH-223ENST00000641597 BIN1O00499 593 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 ZNF213O14771 459 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 FAM160A1Q05DH4 1040 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 ISM2Q6H9L7 571 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 DHX40Q8IX18 779 aaKnown RBP19.66■□□□□ 0.74
PHGDH-223ENST00000641597 BTG4Q9NY30 223 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 A0A0G2JS52 829 aa19.66■□□□□ 0.74
PHGDH-223ENST00000641597 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
PHGDH-223ENST00000641597 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
PHGDH-223ENST00000641597 RALYLQ86SE5 291 aaKnown RBP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 PHKBQ93100 1093 aa19.65■□□□□ 0.74
PHGDH-223ENST00000641597 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 TRMT112Q9UI30 125 aaKnown RBP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-223ENST00000641597 AOPEPQ8N6M6 819 aa19.65■□□□□ 0.74
PHGDH-223ENST00000641597 AKAP11Q9UKA4 1901 aa19.64■□□□□ 0.74
PHGDH-223ENST00000641597 USP27XA6NNY8 438 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 B4E1Z4 1266 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 GOLGA6L19H0YKK7 550 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 CPLX1O14810 134 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 MARCKSP29966 332 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-223ENST00000641597 EVCP57679 992 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 FILIP1Q7Z7B0 1213 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 LINC00301Q8NCQ3 95 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 FBXO18Q8NFZ0 1043 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 CTNNA3Q9UI47 895 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 CTSWP56202 376 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
PHGDH-223ENST00000641597 STK38Q15208 465 aa19.64■□□□□ 0.73
PHGDH-223ENST00000641597 STX1AQ16623 288 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms