RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
SCARB2-221ENST00000640341 HSP90AA4PQ58FG1 418 aa17.02■□□□□ 0.32
SCARB2-221ENST00000640341 DPCR1Q3MIW9 517 aa17.02■□□□□ 0.32
SCARB2-221ENST00000640341 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.31
SCARB2-221ENST00000640341 HSPA2P54652 639 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 CCDC82Q8N4S0 544 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 ZNF213O14771 459 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
SCARB2-221ENST00000640341 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
SCARB2-221ENST00000640341 CTAGE5O15320 804 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
SCARB2-221ENST00000640341 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
SCARB2-221ENST00000640341 JCADQ9P266 1359 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 METTL24Q5JXM2 366 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 TMC6Q7Z403 805 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 PHKBQ93100 1093 aa17■□□□□ 0.31
SCARB2-221ENST00000640341 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
SCARB2-221ENST00000640341 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-221ENST00000640341 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
SCARB2-221ENST00000640341 INCENPQ9NQS7 918 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 IFNKQ9P0W0 207 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 SPTLC2O15270 562 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-221ENST00000640341 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 GPAA1O43292 621 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 TRDNQ13061 729 aa16.99■□□□□ 0.31
SCARB2-221ENST00000640341 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
SCARB2-221ENST00000640341 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 NFXL1Q6ZNB6 911 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-221ENST00000640341 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 SMTNL1A8MU46 457 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
SCARB2-221ENST00000640341 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 SLC9C2Q5TAH2 1124 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 CCDC191Q8NCU4 936 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 ENGASEQ8NFI3 743 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
SCARB2-221ENST00000640341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCARB2-221ENST00000640341 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
SCARB2-221ENST00000640341 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
SCARB2-221ENST00000640341 LINC00301Q8NCQ3 95 aa16.97■□□□□ 0.31
SCARB2-221ENST00000640341 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
SCARB2-221ENST00000640341 XPO4Q9C0E2 1151 aaKnown RBP16.97■□□□□ 0.31
SCARB2-221ENST00000640341 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-221ENST00000640341 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
SCARB2-221ENST00000640341 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 SNAP23O00161 211 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
SCARB2-221ENST00000640341 ZNF202O95125 648 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 EVA1CP58658 441 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 ADALQ6DHV7 355 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 KIAA1468Q9P260 1216 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 ZNF215Q9UL58 517 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-221ENST00000640341 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 CAVIN2O95810 425 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 FAM177A1Q8N128 213 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-221ENST00000640341 FBXO18Q8NFZ0 1043 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 MRFAP1L1Q96HT8 127 aa16.96■□□□□ 0.31
SCARB2-221ENST00000640341 C5P01031 1676 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 B4E1Z4 1266 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 SMAP1Q8IYB5 467 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-221ENST00000640341 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 SENP2Q9HC62 589 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 GOLGA8FQ08AF8 430 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 GOLGA8DPQ0D2H9 430 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 HOMER1Q86YM7 354 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 CLIC6Q96NY7 704 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 ALG1Q9BT22 464 aa16.95■□□□□ 0.3
SCARB2-221ENST00000640341 FOXP2O15409 715 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 ATP1A3P13637 1013 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 ANTXR2P58335 489 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 LRRFIP1Q32MZ4 808 aaKnown RBP16.94■□□□□ 0.3
SCARB2-221ENST00000640341 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
SCARB2-221ENST00000640341 PFKFB1P16118 471 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCARB2-221ENST00000640341 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 SALL1Q9NSC2 1324 aa16.94■□□□□ 0.3
SCARB2-221ENST00000640341 KCNG4Q8TDN1 519 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 APPBP2Q92624 585 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 CTIFO43310 598 aaKnown RBP16.93■□□□□ 0.3
SCARB2-221ENST00000640341 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 KIF6Q6ZMV9 814 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 AGXT2Q9BYV1 514 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 GREM2Q9H772 168 aa16.93■□□□□ 0.3
SCARB2-221ENST00000640341 SLIT3O75094 1523 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms