RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 SEPT8Q92599 483 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 TXNDC9O14530 226 aa18.39■□□□□ 0.54
CACNA1A-258ENST00000638029 BAG1Q99933 345 aaPredicted RBP18.39■□□□□ 0.54
CACNA1A-258ENST00000638029 NAIPQ13075 1403 aa18.39■□□□□ 0.54
CACNA1A-258ENST00000638029 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 ZC3H12CQ9C0D7 883 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 CCDC169A6NNP5 214 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 WDR46O15213 610 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 MYCLP12524 364 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 PYM1Q9BRP8 204 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 ITM2BQ9Y287 266 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
CACNA1A-258ENST00000638029 SPDYE2BA6NHP3 402 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 SPDYE6P0CI01 402 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 CASC4Q6P4E1 433 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 GBP6Q6ZN66 633 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 STX1AQ16623 288 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 KANK3Q6NY19 840 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 LIMCH1Q9UPQ0 1083 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 GKAP1Q5VSY0 366 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 IVLP07476 585 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 MAN1A1P33908 653 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 NUF2Q9BZD4 464 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 ADCY5O95622 1261 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 IARSP41252 1262 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
CACNA1A-258ENST00000638029 M0QZ92 97 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 BICDL2A1A5D9 508 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 BIRC3Q13489 604 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 ATP6V0A2Q9Y487 856 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 ATP6V1E1P36543 226 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 CCDC121Q6ZUS5 278 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 RABEP2Q9H5N1 569 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 CCDC110Q8TBZ0 833 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 STMN2Q93045 179 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 ATP2A1O14983 1001 aa18.37■□□□□ 0.53
CACNA1A-258ENST00000638029 GJB2P29033 226 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 MCM7P33993 719 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 FBXW4P57775 412 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 POTEB2H3BUK9 544 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 CCDC129Q6ZRS4 1044 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 CPLX4Q7Z7G2 160 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 KRT222Q8N1A0 295 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 SDCCAG8Q86SQ7 713 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 PLCB4Q15147 1175 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 LRRC27Q9C0I9 530 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 WTAPQ15007 396 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 RSRC1Q96IZ7 334 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 CAPN2P17655 700 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 UBASH3AP57075 661 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 RAPGEF1Q13905 1077 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 FNBP1Q96RU3 617 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 VPS18Q9P253 973 aa18.36■□□□□ 0.53
CACNA1A-258ENST00000638029 CIB2O75838 187 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 MAFGO15525 162 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 KRT19P08727 400 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 ZNF804AQ7Z570 1209 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 SWAP70Q9UH65 585 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 GSDMDP57764 484 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 METTL13Q8N6R0 699 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 IL1RL1Q01638 556 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 ITKQ08881 620 aa18.35■□□□□ 0.53
CACNA1A-258ENST00000638029 ZNF131P52739 623 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 KIAA1524Q8TCG1 905 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 MED10Q9BTT4 135 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 SETDB1Q15047 1291 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 RABGAP1Q9Y3P9 1069 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 PTPRCP08575 1304 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 ASIC1P78348 528 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 ITIH3Q06033 890 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 DDX12PQ92771 950 aa18.34■□□□□ 0.53
CACNA1A-258ENST00000638029 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms