RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 C20orf194Q5TEA3 1177 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 CCDC122Q5T0U0 273 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 UTP14CQ5TAP6 766 aaKnown RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 JARID2Q92833 1246 aaPredicted RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 ZSCAN16Q9H4T2 348 aaPredicted RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 GIPC1O14908 333 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 SPOPO43791 374 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 BMP15O95972 392 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 KLHL40Q2TBA0 621 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 LDHAL6AQ6ZMR3 332 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 GSTO1P78417 241 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 KRBA2Q6ZNG9 492 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 CDC5LQ99459 802 aaKnown RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 HMG20BQ9P0W2 317 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ANKFY1Q9P2R3 1169 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 SETSIPP0DME0 302 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ATP5DP30049 168 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 SYT10Q6XYQ8 523 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 CACYBPQ9HB71 228 aaKnown RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 MAP3K2Q9Y2U5 619 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 NSD3Q9BZ95 1437 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 MGEA5O60502 916 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ITIH3Q06033 890 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 PNMA8AQ86V59 439 aaPredicted RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 TRIM31Q9BZY9 425 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 SLC4A4Q9Y6R1 1079 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 A0A1B0GUL7 405 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 SPDYE3A6NKU9 549 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 AFAP1L1Q8TED9 768 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 CCDC94Q9BW85 323 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 BICDL2A1A5D9 508 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 HS2ST1Q7LGA3 356 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 KRT23Q9C075 422 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 SBNO2Q9Y2G9 1366 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 POLA1P09884 1462 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 ERBINQ96RT1 1412 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 U2AF2P26368 475 aaKnown RBP eCLIP6.75□□□□□ -1.333e-6■■□□□ 13.6
RFX3-212ENST00000617270 PPP2R3AQ06190 1150 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 HDXQ7Z353 690 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 TSPYL2Q9H2G4 693 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFX3-212ENST00000617270 BACH1O14867 736 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 RILPL1Q5EBL4 403 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 DACT1Q9NYF0 836 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 NDUFAB1O14561 156 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 KRT79Q5XKE5 535 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 AFAP1L2Q8N4X5 818 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 RAB3IPQ96QF0 476 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 SEPT10Q9P0V9 454 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 FRMD4BQ9Y2L6 1034 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 I3L4J1 428 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 THEMISQ8N1K5 641 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 ESR2Q92731 530 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 VEZTQ9HBM0 779 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 XAB2Q9HCS7 855 aaKnown RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 SLFN5Q08AF3 891 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 NAA16Q6N069 864 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 NBPF5PQ86XG9 351 aaPredicted RBP6.75□□□□□ -1.33
RFX3-212ENST00000617270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFX3-212ENST00000617270 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 CLEC11AQ9Y240 323 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 CUX1P39880 1505 aa6.75□□□□□ -1.33
RFX3-212ENST00000617270 RFX1P22670 979 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 CCDC38Q502W7 563 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 TTLL3Q9Y4R7 772 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 DAPK3O43293 454 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 AFAP1Q8N556 730 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 CXorf38Q8TB03 319 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 CYP7A1P22680 504 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 VSIG1Q86XK7 387 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 RBBP5Q15291 538 aaKnown RBP6.74□□□□□ -1.33
RFX3-212ENST00000617270 SUDS3Q9H7L9 328 aaPredicted RBP6.74□□□□□ -1.33
RFX3-212ENST00000617270 NACADO15069 1562 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 STX10O60499 249 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 TRIM75PA6NK02 468 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 C8orf74Q6P047 294 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 GIGYF1O75420 1035 aaPredicted RBP6.74□□□□□ -1.33
RFX3-212ENST00000617270 INPP5BP32019 993 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 MAN1A1P33908 653 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 CCT6AP40227 531 aaKnown RBP6.74□□□□□ -1.33
RFX3-212ENST00000617270 LCA5Q86VQ0 697 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 TMX3Q96JJ7 454 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 TSGA10Q9BZW7 698 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 IFNKQ9P0W0 207 aa6.74□□□□□ -1.33
RFX3-212ENST00000617270 DBF4Q9UBU7 674 aaPredicted RBP6.74□□□□□ -1.33
RFX3-212ENST00000617270 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
RFX3-212ENST00000617270 HMGB2P26583 209 aaKnown RBP6.73□□□□□ -1.33
RFX3-212ENST00000617270 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
RFX3-212ENST00000617270 DNM1Q05193 864 aaKnown RBP6.73□□□□□ -1.33
RFX3-212ENST00000617270 WDR44Q5JSH3 913 aa6.73□□□□□ -1.33
RFX3-212ENST00000617270 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
RFX3-212ENST00000617270 PDCD7Q8N8D1 485 aaKnown RBP6.73□□□□□ -1.33
RFX3-212ENST00000617270 CCDC26Q8TAB7 109 aa6.73□□□□□ -1.33
RFX3-212ENST00000617270 VCX3AQ9NNX9 186 aa6.73□□□□□ -1.33
RFX3-212ENST00000617270 FAM170AA1A519 330 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms