RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SBF2Q86WG5 1849 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-235ENST00000616973 EVCP57679 992 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 HELBQ8NG08 1087 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-235ENST00000616973 CHD4Q14839 1912 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 PHF14O94880 888 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
NR1H3-235ENST00000616973 SCRN1Q12765 414 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 CDC37L1Q7L3B6 337 aa18.59■□□□□ 0.57
NR1H3-235ENST00000616973 WDR19Q8NEZ3 1342 aa18.58■□□□□ 0.57
NR1H3-235ENST00000616973 FAM43AQ8N2R8 423 aa18.58■□□□□ 0.56
NR1H3-235ENST00000616973 SPATA5Q8NB90 893 aa18.58■□□□□ 0.56
NR1H3-235ENST00000616973 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.56
NR1H3-235ENST00000616973 TCRBV5S4A2TA0A5A2 114 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 SYCE3A1L190 88 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 PDE6AP16499 860 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
NR1H3-235ENST00000616973 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
NR1H3-235ENST00000616973 ELP1O95163 1332 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 DTNBO60941 627 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 HMGN5P82970 282 aaKnown RBP18.57■□□□□ 0.56
NR1H3-235ENST00000616973 APOBRQ0VD83 1088 aa18.57■□□□□ 0.56
NR1H3-235ENST00000616973 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 FIBPO43427 364 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 JAK2O60674 1132 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 IDH1O75874 414 aaKnown RBP18.56■□□□□ 0.56
NR1H3-235ENST00000616973 KRT85P78386 507 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-235ENST00000616973 NSUN7Q8NE18 718 aaKnown RBP18.56■□□□□ 0.56
NR1H3-235ENST00000616973 RBSNQ9H1K0 784 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 COL4A1P02462 1669 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 TAF1P21675 1872 aa18.56■□□□□ 0.56
NR1H3-235ENST00000616973 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 ZNF213O14771 459 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 LETM1O95202 739 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-235ENST00000616973 MCM5P33992 734 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 NCOA7Q8NI08 942 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 USP21Q9UK80 565 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 PDIA3P30101 505 aaKnown RBP18.55■□□□□ 0.56
NR1H3-235ENST00000616973 CHRNDQ07001 517 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 ALX1Q15699 326 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 CCDC183Q5T5S1 534 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
NR1H3-235ENST00000616973 SALL1Q9NSC2 1324 aa18.54■□□□□ 0.56
NR1H3-235ENST00000616973 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
NR1H3-235ENST00000616973 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
NR1H3-235ENST00000616973 ANP32BQ92688 251 aaKnown RBP18.54■□□□□ 0.56
NR1H3-235ENST00000616973 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
NR1H3-235ENST00000616973 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
NR1H3-235ENST00000616973 HAND2P61296 217 aa18.53■□□□□ 0.56
NR1H3-235ENST00000616973 FAM184AQ8NB25 1140 aa18.53■□□□□ 0.56
NR1H3-235ENST00000616973 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
NR1H3-235ENST00000616973 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-235ENST00000616973 ZSCAN16Q9H4T2 348 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-235ENST00000616973 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
NR1H3-235ENST00000616973 NAA16Q6N069 864 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-235ENST00000616973 FERMT3Q86UX7 667 aa18.53■□□□□ 0.56
NR1H3-235ENST00000616973 TIAM2Q8IVF5 1701 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 C4AP0C0L4 1744 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 RESTQ13127 1097 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-235ENST00000616973 RALYLQ86SE5 291 aaKnown RBP18.52■□□□□ 0.56
NR1H3-235ENST00000616973 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 TSPY26PQ9H489 355 aa18.52■□□□□ 0.56
NR1H3-235ENST00000616973 BSDC1Q9NW68 430 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-235ENST00000616973 PTPDC1A2A3K4 754 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 SNAP23O00161 211 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 PRC1O43663 620 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 CHST3Q7LGC8 479 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 TTC6Q86TZ1 520 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 AIDAQ96BJ3 306 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 ZNF804BA4D1E1 1349 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 MYH13Q9UKX3 1938 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 H3BQV1 296 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 ANTXR2P58335 489 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 NBPF3Q9H094 633 aa18.51■□□□□ 0.55
NR1H3-235ENST00000616973 BCAMP50895 628 aa18.5■□□□□ 0.55
NR1H3-235ENST00000616973 KCNQ4P56696 695 aa18.5■□□□□ 0.55
NR1H3-235ENST00000616973 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
NR1H3-235ENST00000616973 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
NR1H3-235ENST00000616973 PATL2C9JE40 543 aaKnown RBP18.49■□□□□ 0.55
NR1H3-235ENST00000616973 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
NR1H3-235ENST00000616973 TRDNQ13061 729 aa18.49■□□□□ 0.55
NR1H3-235ENST00000616973 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
NR1H3-235ENST00000616973 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
NR1H3-235ENST00000616973 GNAT2P19087 354 aa18.49■□□□□ 0.55
NR1H3-235ENST00000616973 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms