RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PPP1R7Q15435 360 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 E2F4Q16254 413 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 CCDC65Q8IXS2 484 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 AIDAQ96BJ3 306 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 WHAMMQ8TF30 809 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 CLTAP09496 248 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 STMN1P16949 149 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 SPTLC2O15270 562 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 TRPC3Q13507 836 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 CLUL1Q15846 466 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 SPTY2D1Q68D10 685 aaPredicted RBP15.48■□□□□ 0.07
CHD1-212ENST00000614616 DENND2CQ68D51 928 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 TRIM35Q9UPQ4 493 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 RRAGBQ5VZM2 374 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 PHLDB3Q6NSJ2 640 aa15.48■□□□□ 0.07
CHD1-212ENST00000614616 PPANQ9NQ55 473 aaKnown RBP15.48■□□□□ 0.07
CHD1-212ENST00000614616 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 METAP2P50579 478 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHD1-212ENST00000614616 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
CHD1-212ENST00000614616 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 CDC25BP30305 580 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 TSC22D3Q99576 134 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 TRIM6Q9C030 488 aaPredicted RBP15.47■□□□□ 0.07
CHD1-212ENST00000614616 IRX1P78414 480 aaPredicted RBP15.47■□□□□ 0.07
CHD1-212ENST00000614616 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 PAF1Q8N7H5 531 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 CCT5P48643 541 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 VSIG1Q86XK7 387 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 RABGGTAQ92696 567 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
CHD1-212ENST00000614616 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 TLDC2A0PJX2 215 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 IRX5P78411 483 aaPredicted RBP15.47■□□□□ 0.07
CHD1-212ENST00000614616 PDE11AQ9HCR9 933 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 GSTA5Q7RTV2 222 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 GSDMBQ8TAX9 411 aa15.47■□□□□ 0.07
CHD1-212ENST00000614616 CATIPQ7Z7H3 387 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
CHD1-212ENST00000614616 CCDC25Q86WR0 208 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 RABEP2Q9H5N1 569 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 CCDC92Q53HC0 331 aaPredicted RBP15.46■□□□□ 0.07
CHD1-212ENST00000614616 SAAL1Q96ER3 474 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 ORC3Q9UBD5 711 aaPredicted RBP15.46■□□□□ 0.07
CHD1-212ENST00000614616 TSKSQ9UJT2 592 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 IARSP41252 1262 aaKnown RBP15.46■□□□□ 0.07
CHD1-212ENST00000614616 BRAPQ7Z569 592 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 CCDC63Q8NA47 563 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 FAM204AQ9H8W3 233 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 ZNF287Q9HBT7 754 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 FAF1Q9UNN5 650 aaPredicted RBP15.46■□□□□ 0.07
CHD1-212ENST00000614616 MAP3K21Q5TCX8 1036 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 NECAB1Q8N987 351 aa15.46■□□□□ 0.07
CHD1-212ENST00000614616 UBA7P41226 1012 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 IQCA1Q86XH1 822 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 CENPKQ9BS16 269 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 USP16Q9Y5T5 823 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 AFMP43652 599 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 CFAP157Q5JU67 520 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 IGSF22Q8N9C0 903 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 ARMC2Q8NEN0 867 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 NAPBQ9H115 298 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 CLSTN2Q9H4D0 955 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 NESP48681 1621 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 HNRNPH2P55795 449 aaKnown RBP15.45■□□□□ 0.06
CHD1-212ENST00000614616 CALCOCO2Q13137 446 aa15.45■□□□□ 0.06
CHD1-212ENST00000614616 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 BIRC2Q13490 618 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 FBXO18Q8NFZ0 1043 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
CHD1-212ENST00000614616 BCAP29Q9UHQ4 241 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 GOLGA8AA7E2F4 631 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 TXNDC9O14530 226 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 ZNF76P36508 570 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 SCOCQ9UIL1 159 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 PRR16Q569H4 304 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 TTC41PQ6P2S7 1318 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 RUFY3Q7L099 469 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
CHD1-212ENST00000614616 PLEKHO1Q53GL0 409 aaPredicted RBP15.43■□□□□ 0.06
CHD1-212ENST00000614616 TMTC1Q8IUR5 882 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 RNF41Q9H4P4 317 aaPredicted RBP15.43■□□□□ 0.06
CHD1-212ENST00000614616 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 DNAJC8O75937 253 aaPredicted RBP15.43■□□□□ 0.06
CHD1-212ENST00000614616 CCDC194A0A1B0GVG4 234 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 MYO1CO00159 1063 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 AK2P54819 239 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 ACTR5Q9H9F9 607 aaPredicted RBP15.43■□□□□ 0.06
CHD1-212ENST00000614616 SUFUQ9UMX1 484 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 FANCCQ00597 558 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 TADA2BQ86TJ2 420 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 ARHGAP45Q92619 1136 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 TCERG1LQ5VWI1 586 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 RAPGEF4Q8WZA2 1011 aa15.43■□□□□ 0.06
CHD1-212ENST00000614616 EPSTI1Q96J88 318 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms