RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TSHZ3Q63HK5 1081 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 SMC6Q96SB8 1091 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 COPS6Q7L5N1 327 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 IQUBQ8NA54 791 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 VPS18Q9P253 973 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 ATP2A2P16615 1042 aaKnown RBP19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 LMBR1LQ6UX01 489 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 GPATCH8Q9UKJ3 1502 aaKnown RBP19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 TMEM87AQ8NBN3 555 aa19.67■□□□□ 0.74
HMGXB3-206ENST00000613459 VAV2P52735 878 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 RUFY3Q7L099 469 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 DHX58Q96C10 678 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 RPL13P26373 211 aaKnown RBP19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 MMRN2Q9H8L6 949 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 AOX1Q06278 1338 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 CREB3L3Q68CJ9 461 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 NGLY1Q96IV0 654 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 SETDB2Q96T68 719 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 ELP1O95163 1332 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
HMGXB3-206ENST00000613459 HDXQ7Z353 690 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 PAIP2Q9BPZ3 127 aaKnown RBP19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 VWA3BQ502W6 1294 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 RAB11FIP4Q86YS3 637 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 A6NNZ2 444 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 FAM13AO94988 1023 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 TUBB8Q3ZCM7 444 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 STK24Q9Y6E0 443 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 SPDYE3A6NKU9 549 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 PRIM1P49642 420 aaKnown RBP19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 CEP85Q6P2H3 762 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 SELENOSQ9BQE4 189 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 DDX23Q9BUQ8 820 aaKnown RBP19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 MTUS1Q9ULD2 1270 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 MRVI1Q9Y6F6 885 aa19.65■□□□□ 0.74
HMGXB3-206ENST00000613459 ALDH3A1P30838 453 aa19.64■□□□□ 0.74
HMGXB3-206ENST00000613459 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 MSH6P52701 1360 aa19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 LUC7L2Q9Y383 392 aaKnown RBP19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 NAP1L3Q99457 506 aaPredicted RBP19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 FAM76AQ8TAV0 307 aa19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 CEP83Q9Y592 693 aa19.64■□□□□ 0.73
HMGXB3-206ENST00000613459 MARCKSP29966 332 aaPredicted RBP19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 AK2P54819 239 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 UBXN1Q04323 297 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 UHRF1BP1LA0JNW5 1464 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 IRX3P78415 501 aaPredicted RBP19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 DTHD1Q6ZMT9 781 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 ADAMTS2O95450 1211 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 RSRC1Q96IZ7 334 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 ATP5DP30049 168 aa19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 NCBP1Q09161 790 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-206ENST00000613459 MYL5Q02045 173 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 SAMD15Q9P1V8 674 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 PLCD1P51178 756 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC14Q49A88 953 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 APBB1IPQ7Z5R6 666 aaPredicted RBP19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 ANAPC4Q9UJX5 808 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 C8orf58Q8NAV2 365 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 RAB3IL1Q8TBN0 382 aa19.62■□□□□ 0.73
HMGXB3-206ENST00000613459 GSTA5Q7RTV2 222 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC114Q96M63 670 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 GLT8D2Q9H1C3 349 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CROCCP2Q86T23 111 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CSRNP2Q9H175 543 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 RASSF4Q9H2L5 321 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 LMOD1P29536 600 aaPredicted RBP19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 RILPL1Q5EBL4 403 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CPLX4Q7Z7G2 160 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CERS3Q8IU89 383 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 LRRC2Q9BYS8 371 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 PTGS1P23219 599 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 SETDB1Q15047 1291 aa19.61■□□□□ 0.73
HMGXB3-206ENST00000613459 CEP57Q86XR8 500 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 ERO1AQ96HE7 468 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 CHMLP26374 656 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC65Q8IXS2 484 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 NOL3O60936 208 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 IGSF3O75054 1194 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 EIF4A2Q14240 407 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 ZNF569Q5MCW4 686 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 OGFOD1Q8N543 542 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 ZBTB40Q9NUA8 1239 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 A0A1B0GUL7 405 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 ZBTB16Q05516 673 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 CCDC26Q8TAB7 109 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 TMEM87BQ96K49 555 aa19.6■□□□□ 0.73
HMGXB3-206ENST00000613459 AKR1B15C9JRZ8 316 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms