RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 GPR101Q96P66 508 aaPredicted RBP22.49■■□□□ 1.19
SSBP4-212ENST00000601919 CD209Q9NNX6 404 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 NDUFB9Q9Y6M9 179 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 MYH7P12883 1935 aa22.49■■□□□ 1.19
SSBP4-212ENST00000601919 RIMBP2O15034 1052 aa22.48■■□□□ 1.19
SSBP4-212ENST00000601919 ZFYP08048 801 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-212ENST00000601919 IL1R1P14778 569 aa22.48■■□□□ 1.19
SSBP4-212ENST00000601919 CHMLP26374 656 aa22.48■■□□□ 1.19
SSBP4-212ENST00000601919 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
SSBP4-212ENST00000601919 EDC3Q96F86 508 aaKnown RBP22.48■■□□□ 1.19
SSBP4-212ENST00000601919 IQSEC3Q9UPP2 1182 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-212ENST00000601919 CYP2E1P05181 493 aaPredicted RBP22.47■■□□□ 1.19
SSBP4-212ENST00000601919 PI16Q6UXB8 463 aa22.47■■□□□ 1.19
SSBP4-212ENST00000601919 ZGPATQ8N5A5 531 aaKnown RBP22.47■■□□□ 1.19
SSBP4-212ENST00000601919 WDR66Q8TBY9 1149 aa22.47■■□□□ 1.19
SSBP4-212ENST00000601919 FER1L6Q2WGJ9 1857 aa22.46■■□□□ 1.19
SSBP4-212ENST00000601919 IGSF3O75054 1194 aa22.46■■□□□ 1.19
SSBP4-212ENST00000601919 ANTXR1Q9H6X2 564 aa22.46■■□□□ 1.19
SSBP4-212ENST00000601919 DOCK2Q92608 1830 aa22.45■■□□□ 1.19
SSBP4-212ENST00000601919 KIAA2012Q0VF49 1180 aa22.45■■□□□ 1.18
SSBP4-212ENST00000601919 MAP3K12Q12852 859 aa22.45■■□□□ 1.18
SSBP4-212ENST00000601919 SYT17Q9BSW7 474 aa22.45■■□□□ 1.18
SSBP4-212ENST00000601919 PPIP5K2O43314 1243 aa22.44■■□□□ 1.18
SSBP4-212ENST00000601919 CHAF1AQ13111 956 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-212ENST00000601919 SPTY2D1Q68D10 685 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-212ENST00000601919 PODNQ7Z5L7 613 aa22.44■■□□□ 1.18
SSBP4-212ENST00000601919 UPF2Q9HAU5 1272 aaKnown RBP22.44■■□□□ 1.18
SSBP4-212ENST00000601919 LRP2BPQ9P2M1 347 aa22.44■■□□□ 1.18
SSBP4-212ENST00000601919 SALL1Q9NSC2 1324 aa22.43■■□□□ 1.18
SSBP4-212ENST00000601919 RNF113AO15541 343 aaKnown RBP22.43■■□□□ 1.18
SSBP4-212ENST00000601919 IDH1O75874 414 aaKnown RBP22.43■■□□□ 1.18
SSBP4-212ENST00000601919 TMED8Q6PL24 325 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-212ENST00000601919 TBC1D22AQ8WUA7 517 aa22.43■■□□□ 1.18
SSBP4-212ENST00000601919 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
SSBP4-212ENST00000601919 PIH1D3Q9NQM4 214 aaKnown RBP22.43■■□□□ 1.18
SSBP4-212ENST00000601919 WWC3Q9ULE0 1092 aa22.43■■□□□ 1.18
SSBP4-212ENST00000601919 COL1A1P02452 1464 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-212ENST00000601919 RAD50Q92878 1312 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 CHD4Q14839 1912 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 REC8O95072 547 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 ESYT1Q9BSJ8 1104 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 CCDC88AQ3V6T2 1871 aa22.42■■□□□ 1.18
SSBP4-212ENST00000601919 MYO5AQ9Y4I1 1855 aaKnown RBP22.42■■□□□ 1.18
SSBP4-212ENST00000601919 FAM205AQ6ZU69 1335 aa22.41■■□□□ 1.18
SSBP4-212ENST00000601919 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
SSBP4-212ENST00000601919 AOC3Q16853 763 aa22.41■■□□□ 1.18
SSBP4-212ENST00000601919 DOK7Q18PE1 504 aa22.41■■□□□ 1.18
SSBP4-212ENST00000601919 CWC27Q6UX04 472 aaKnown RBP22.41■■□□□ 1.18
SSBP4-212ENST00000601919 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
SSBP4-212ENST00000601919 SLC9C2Q5TAH2 1124 aa22.4■■□□□ 1.18
SSBP4-212ENST00000601919 LARGE2Q8N3Y3 721 aa22.4■■□□□ 1.18
SSBP4-212ENST00000601919 HELLSQ9NRZ9 838 aa22.4■■□□□ 1.18
SSBP4-212ENST00000601919 ECE2O60344 883 aa22.39■■□□□ 1.17
SSBP4-212ENST00000601919 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
SSBP4-212ENST00000601919 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.17
SSBP4-212ENST00000601919 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-212ENST00000601919 UBE3CQ15386 1083 aa22.39■■□□□ 1.17
SSBP4-212ENST00000601919 ZNF277Q9NRM2 450 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-212ENST00000601919 RAI14Q9P0K7 980 aa22.39■■□□□ 1.17
SSBP4-212ENST00000601919 MAST2Q6P0Q8 1798 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 SGSM2O43147 1006 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 ADD2P35612 726 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 ZMYM1Q5SVZ6 1142 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 TTLL5Q6EMB2 1281 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 KIAA1211Q6ZU35 1233 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 APPBP2Q92624 585 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 DBNDD1Q9H9R9 158 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 SUGT1Q9Y2Z0 365 aa22.38■■□□□ 1.17
SSBP4-212ENST00000601919 LDHBP07195 334 aaKnown RBP22.37■■□□□ 1.17
SSBP4-212ENST00000601919 PDE6AP16499 860 aa22.37■■□□□ 1.17
SSBP4-212ENST00000601919 GTF2IP78347 998 aa22.37■■□□□ 1.17
SSBP4-212ENST00000601919 NIM1KQ8IY84 436 aa22.37■■□□□ 1.17
SSBP4-212ENST00000601919 FAM227BQ96M60 508 aa22.37■■□□□ 1.17
SSBP4-212ENST00000601919 EPB41L2O43491 1005 aaKnown RBP22.36■■□□□ 1.17
SSBP4-212ENST00000601919 MFSD14BQ5SR56 506 aa22.36■■□□□ 1.17
SSBP4-212ENST00000601919 DZIP1Q86YF9 867 aaKnown RBP22.36■■□□□ 1.17
SSBP4-212ENST00000601919 MAGEB6Q8N7X4 407 aa22.36■■□□□ 1.17
SSBP4-212ENST00000601919 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
SSBP4-212ENST00000601919 A0A0D9SFI3 127 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 USP17L3A6NCW0 530 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 USP17L4A6NCW7 530 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 NFKBIEO00221 500 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 FKBP1AP62942 108 aaKnown RBP22.35■■□□□ 1.17
SSBP4-212ENST00000601919 GSTO1P78417 241 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 STRIP1Q5VSL9 837 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 NAA16Q6N069 864 aaPredicted RBP22.35■■□□□ 1.17
SSBP4-212ENST00000601919 USP17L1Q7RTZ2 530 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 JDP2Q8WYK2 163 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 JAG2Q9Y219 1238 aa22.35■■□□□ 1.17
SSBP4-212ENST00000601919 ZNF532Q9HCE3 1301 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 PSME4Q14997 1843 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 SEC24BO95487 1268 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 SLF2Q8IX21 1173 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 ANO2Q9NQ90 1003 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 ZNRF3Q9ULT6 936 aa22.34■■□□□ 1.17
SSBP4-212ENST00000601919 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
SSBP4-212ENST00000601919 MAST3O60307 1309 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms