RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PDS5AQ29RF7 1337 aaKnown RBP17.75■□□□□ 0.43
VRK3-212ENST00000596814 RIMBP2O15034 1052 aa17.74■□□□□ 0.43
VRK3-212ENST00000596814 TDRD7Q8NHU6 1098 aaKnown RBP17.74■□□□□ 0.43
VRK3-212ENST00000596814 FHDC1Q9C0D6 1143 aaPredicted RBP17.74■□□□□ 0.43
VRK3-212ENST00000596814 CD209Q9NNX6 404 aa17.74■□□□□ 0.43
VRK3-212ENST00000596814 FER1L6Q2WGJ9 1857 aa17.73■□□□□ 0.43
VRK3-212ENST00000596814 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
VRK3-212ENST00000596814 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
VRK3-212ENST00000596814 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
VRK3-212ENST00000596814 BCS1LQ9Y276 419 aa17.73■□□□□ 0.43
VRK3-212ENST00000596814 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
VRK3-212ENST00000596814 IL1R1P14778 569 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 PSMD1Q99460 953 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 COA1Q9GZY4 146 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 SEC24BO95487 1268 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
VRK3-212ENST00000596814 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 ESYT1Q9BSJ8 1104 aa17.72■□□□□ 0.43
VRK3-212ENST00000596814 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.72■□□□□ 0.432e-7■■■□□ 18.9
VRK3-212ENST00000596814 CHD4Q14839 1912 aa17.71■□□□□ 0.43
VRK3-212ENST00000596814 MAST2Q6P0Q8 1798 aa17.71■□□□□ 0.43
VRK3-212ENST00000596814 IDH1O75874 414 aaKnown RBP17.71■□□□□ 0.43
VRK3-212ENST00000596814 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
VRK3-212ENST00000596814 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
VRK3-212ENST00000596814 G3V3G9 751 aa17.7■□□□□ 0.42
VRK3-212ENST00000596814 ZFYP08048 801 aaPredicted RBP17.7■□□□□ 0.42
VRK3-212ENST00000596814 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
VRK3-212ENST00000596814 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
VRK3-212ENST00000596814 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
VRK3-212ENST00000596814 RAD50Q92878 1312 aa17.7■□□□□ 0.42
VRK3-212ENST00000596814 RNF113AO15541 343 aaKnown RBP17.69■□□□□ 0.42
VRK3-212ENST00000596814 KIAA2012Q0VF49 1180 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 MAP3K12Q12852 859 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 AOC3Q16853 763 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
VRK3-212ENST00000596814 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 CCDC88AQ3V6T2 1871 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 SGSM2O43147 1006 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 PPIP5K2O43314 1243 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 DOK7Q18PE1 504 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 LRP2BPQ9P2M1 347 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 JAG2Q9Y219 1238 aa17.69■□□□□ 0.42
VRK3-212ENST00000596814 SALL1Q9NSC2 1324 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 REC8O95072 547 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 CHGBP05060 677 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 ZGPATQ8N5A5 531 aaKnown RBP17.68■□□□□ 0.42
VRK3-212ENST00000596814 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 IL25Q9H293 177 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
VRK3-212ENST00000596814 ADD2P35612 726 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 TAOK3Q9H2K8 898 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 FAM205AQ6ZU69 1335 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 ECE2O60344 883 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 PDE6AP16499 860 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 ZMYM1Q5SVZ6 1142 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 PODNQ7Z5L7 613 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 APPBP2Q92624 585 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 ZNF277Q9NRM2 450 aaPredicted RBP17.67■□□□□ 0.42
VRK3-212ENST00000596814 RAI14Q9P0K7 980 aa17.67■□□□□ 0.42
VRK3-212ENST00000596814 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 UBE3CQ15386 1083 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 MAGEB6Q8N7X4 407 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 TBC1D22AQ8WUA7 517 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 HELLSQ9NRZ9 838 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 ZNF646O15015 1829 aaPredicted RBP17.66■□□□□ 0.42
VRK3-212ENST00000596814 PSME4Q14997 1843 aa17.66■□□□□ 0.42
VRK3-212ENST00000596814 NFKBIEO00221 500 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 GTF2IP78347 998 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
VRK3-212ENST00000596814 LARGE2Q8N3Y3 721 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 ANO2Q9NQ90 1003 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
VRK3-212ENST00000596814 MAST3O60307 1309 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 ZNF532Q9HCE3 1301 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 LTBP3Q9NS15 1303 aa17.65■□□□□ 0.42
VRK3-212ENST00000596814 PRDX5P30044 214 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
VRK3-212ENST00000596814 SEC62Q99442 399 aaKnown RBP17.64■□□□□ 0.41
VRK3-212ENST00000596814 COL4A5P29400 1685 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 IGSF3O75054 1194 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
VRK3-212ENST00000596814 MFSD14BQ5SR56 506 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 ZNF589Q86UQ0 364 aaPredicted RBP17.64■□□□□ 0.41
VRK3-212ENST00000596814 OSBP2Q969R2 916 aa17.64■□□□□ 0.41
VRK3-212ENST00000596814 CCDC171Q6TFL3 1326 aa17.63■□□□□ 0.41
VRK3-212ENST00000596814 M0R2C6 588 aa17.63■□□□□ 0.41
VRK3-212ENST00000596814 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
VRK3-212ENST00000596814 DZIP1Q86YF9 867 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms