RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MCTP2Q6DN12 878 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
SEH1L-208ENST00000590843 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 SHROOM2Q13796 1616 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
SEH1L-208ENST00000590843 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
SEH1L-208ENST00000590843 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
SEH1L-208ENST00000590843 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 RAD17O75943 681 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
SEH1L-208ENST00000590843 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 TBCAO75347 108 aaKnown RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 LRRC45Q96CN5 670 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 LIG1P18858 919 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 GNA11P29992 359 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
SEH1L-208ENST00000590843 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
SEH1L-208ENST00000590843 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 NR2E3Q9Y5X4 410 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 MYOM2P54296 1465 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
SEH1L-208ENST00000590843 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 IL13P35225 146 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 BMP15O95972 392 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 CALML3P27482 149 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 RABEP1Q15276 862 aa13.18□□□□□ -0.3
SEH1L-208ENST00000590843 SKIV2LQ15477 1246 aaKnown RBP13.18□□□□□ -0.3
SEH1L-208ENST00000590843 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
SEH1L-208ENST00000590843 FBLN1P23142 703 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 TCP10Q12799 353 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 BCAMP50895 628 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 PIGBQ92521 554 aa13.17□□□□□ -0.3
SEH1L-208ENST00000590843 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
SEH1L-208ENST00000590843 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
SEH1L-208ENST00000590843 SLC1A4P43007 532 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 MCM5P33992 734 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
SEH1L-208ENST00000590843 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
SEH1L-208ENST00000590843 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SEH1L-208ENST00000590843 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 NAPAP54920 295 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 ANKRD62A6NC57 917 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 FERMT1Q9BQL6 677 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 IMPG2Q9BZV3 1241 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
SEH1L-208ENST00000590843 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
SEH1L-208ENST00000590843 MSNP26038 577 aaKnown RBP13.15□□□□□ -0.3
SEH1L-208ENST00000590843 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 HUNKP57058 714 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 SMARCE1Q969G3 411 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
SEH1L-208ENST00000590843 PDE4DQ08499 809 aa13.15□□□□□ -0.31
SEH1L-208ENST00000590843 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms