RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 HLA-DOAP06340 250 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 TLDC2A0PJX2 215 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 KRT2P35908 639 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 CCDC110Q8TBZ0 833 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 LRRC45Q96CN5 670 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 SERPINA10Q9UK55 444 aa14.73□□□□□ -0.05
RNF43-208ENST00000584437 NUP160Q12769 1436 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 ZNF75DP51815 510 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 STX17P56962 302 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 GSTA5Q7RTV2 222 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 ANAPC4Q9UJX5 808 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 KIF14Q15058 1648 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 RAPGEF3O95398 923 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 ARHGAP25P42331 645 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 CPSF2Q9P2I0 782 aaKnown RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 ATP2A2P16615 1042 aaKnown RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 KRT79Q5XKE5 535 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 INTS8Q75QN2 995 aaKnown RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 NAP1L3Q99457 506 aaPredicted RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 PAG1Q9NWQ8 432 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 STX8Q9UNK0 236 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 SLC4A4Q9Y6R1 1079 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 GNAT2P19087 354 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 CROCCP2Q86T23 111 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 C8orf58Q8NAV2 365 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 NKIRAS1Q9NYS0 192 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 MKRN1Q9UHC7 482 aaKnown RBP14.72□□□□□ -0.05
RNF43-208ENST00000584437 NOS1P29475 1434 aa14.72□□□□□ -0.05
RNF43-208ENST00000584437 RLBP1P12271 317 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 SEPT6Q14141 434 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 C6orf50Q9HD87 102 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 CABP5Q9NP86 173 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 NOL3O60936 208 aaKnown RBP14.71□□□□□ -0.05
RNF43-208ENST00000584437 WDHD1O75717 1129 aaPredicted RBP14.71□□□□□ -0.05
RNF43-208ENST00000584437 ATP11AP98196 1134 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 SAMM50Q9Y512 469 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 GPTP24298 496 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 CEP128Q6ZU80 1094 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 LMNTD2Q8IXW0 634 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 PPP1R9BQ96SB3 815 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 CHPF2Q9P2E5 772 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 APOBRQ0VD83 1088 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 BICD1Q96G01 975 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 KCNK9Q9NPC2 374 aa14.71□□□□□ -0.05
RNF43-208ENST00000584437 PIK3C2GO75747 1445 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 GOLGA6CA6NDK9 693 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 RNF113AO15541 343 aaKnown RBP14.71□□□□□ -0.06
RNF43-208ENST00000584437 GOLGA6DP0CG33 693 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 TSPY3P0CV98 308 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 TSPY8P0CW00 308 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 SYNCQ9H7C4 482 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 GOLGA6AQ9NYA3 693 aa14.71□□□□□ -0.06
RNF43-208ENST00000584437 ARID5AQ03989 594 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 CYP26C1Q6V0L0 522 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 UBLCP1Q8WVY7 318 aaPredicted RBP14.7□□□□□ -0.06
RNF43-208ENST00000584437 SOS1Q07889 1333 aaPredicted RBP14.7□□□□□ -0.06
RNF43-208ENST00000584437 ELF2Q15723 593 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 IGSF22Q8N9C0 903 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 STMN2Q93045 179 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 CARD6Q9BX69 1037 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 MRVI1Q9Y6F6 885 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 CYP7A1P22680 504 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
RNF43-208ENST00000584437 LLPHQ9BRT6 129 aaKnown RBP14.7□□□□□ -0.06
RNF43-208ENST00000584437 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 C8orf74Q6P047 294 aa14.7□□□□□ -0.06
RNF43-208ENST00000584437 RPGRQ92834 1020 aaKnown RBP14.7□□□□□ -0.06
RNF43-208ENST00000584437 ARHGAP6O43182 974 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 VAMP4O75379 141 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 NAPAP54920 295 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 VWA3BQ502W6 1294 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 SLC9C2Q5TAH2 1124 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 CACNA2D3Q8IZS8 1091 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 ATP6V0A2Q9Y487 856 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 KIAA1524Q8TCG1 905 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 DDX23Q9BUQ8 820 aaKnown RBP14.69□□□□□ -0.06
RNF43-208ENST00000584437 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.061e-12■■□□□ 13.6
RNF43-208ENST00000584437 PABPN1LA6NDY0 278 aaKnown RBP14.69□□□□□ -0.06
RNF43-208ENST00000584437 PPP1R7Q15435 360 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 RUFY4Q6ZNE9 571 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 HS2ST1Q7LGA3 356 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 CCDC63Q8NA47 563 aa14.69□□□□□ -0.06
RNF43-208ENST00000584437 A0A1B0GVL5 298 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 SMIM23A6NLE4 172 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 DTHD1Q6ZMT9 781 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 FANCCQ00597 558 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 MAP7D1Q3KQU3 841 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 IFT20Q8IY31 132 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms