RNA–Protein interactions for RNA: ENST00000581544.5

EIF4A1-218, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 1,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-218	ENST00000581544	HSPD1	P10809	573 aa	Known RBP	13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	NEK4	P51957	841 aa		13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	LEMD3	Q9Y2U8	911 aa		13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	SLX4	Q8IY92	1834 aa		13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	SNED1	Q8TER0	1413 aa		13.67	□□□□□ -0.22
EIF4A1-218	ENST00000581544	XDH	P47989	1333 aa		13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	CUL4A	Q13619	759 aa		13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	DEFB132	Q7Z7B7	95 aa		13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	ZNF384	Q8TF68	577 aa		13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	RBM17	Q96I25	401 aa	Known RBP	13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544		U3KPZ7	1027 aa	Predicted RBP	13.66	□□□□□ -0.22
EIF4A1-218	ENST00000581544	ST18	O60284	1047 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	CYP21A2	P08686	494 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	BAG6	P46379	1132 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	ZSCAN25	Q6NSZ9	544 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	TMC4	Q7Z404	712 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	RPGR	Q92834	1020 aa	Known RBP	13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	UPF3B	Q9BZI7	483 aa	Known RBP	13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	STK32B	Q9NY57	414 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	TIAM2	Q8IVF5	1701 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	ZNF532	Q9HCE3	1301 aa		13.65	□□□□□ -0.22
EIF4A1-218	ENST00000581544	MCM2	P49736	904 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	GPSM2	P81274	684 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SLC9C2	Q5TAH2	1124 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	STOX1	Q6ZVD7	989 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TDRD7	Q8NHU6	1098 aa	Known RBP	13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	DAXX	Q9UER7	740 aa	Predicted RBP	13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ZMYM6	O95789	1325 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544		A0A0G2JLW4	131 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	NPHP1	O15259	732 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	GPAA1	O43292	621 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	NPR1	P16066	1061 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	HIBADH	P31937	336 aa	Known RBP	13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SP8	Q8IXZ3	490 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TMX3	Q96JJ7	454 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	STRBP	Q96SI9	672 aa	Known RBP	13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	DENND2A	Q9ULE3	1009 aa		13.64	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CDK5RAP2	Q96SN8	1893 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	C10orf71	Q711Q0	1435 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SALL1	Q9NSC2	1324 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	IGSF3	O75054	1194 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	IDH1	O75874	414 aa	Known RBP	13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ALX1	Q15699	326 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CAVIN4	Q5BKX8	364 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	MSL1	Q68DK7	614 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	RUFY3	Q7L099	469 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CCDC125	Q86Z20	511 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	GNL3L	Q9NVN8	582 aa	Known RBP	13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ATP6V0A2	Q9Y487	856 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PARP3	Q9Y6F1	533 aa		13.63	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CPA1	P15085	419 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ZKSCAN1	P17029	563 aa	Predicted RBP	13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ATP2B4	P23634	1241 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PDE6B	P35913	854 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	MAP3K12	Q12852	859 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	RNF20	Q5VTR2	975 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ADGRA1	Q86SQ6	560 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	JAKMIP1	Q96N16	626 aa	Known RBP	13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	NBPF3	Q9H094	633 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	POLL	Q9UGP5	575 aa		13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	BRCA1	P38398	1863 aa	Known RBP	13.62	□□□□□ -0.23
EIF4A1-218	ENST00000581544	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	MYH2	Q9UKX2	1941 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	FGA	P02671	866 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	IL1R1	P14778	569 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CAST	P20810	708 aa	Known RBP	13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	AK2	P54819	239 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	WASHC4	Q2M389	1173 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TTLL5	Q6EMB2	1281 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TMED8	Q6PL24	325 aa	Predicted RBP	13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	MAGEB6	Q8N7X4	407 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TBC1D16	Q8TBP0	767 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	MASTL	Q96GX5	879 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	AGXT2	Q9BYV1	514 aa		13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SLK	Q9H2G2	1235 aa	Predicted RBP	13.61	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PPEF1	O14829	653 aa	Predicted RBP	13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	RPS6KB1	P23443	525 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	KCNJ4	P48050	445 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	EXOSC10	Q01780	885 aa	Known RBP	13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	ST3GAL1	Q11201	340 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	KRT32	Q14532	448 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	STYK1	Q6J9G0	422 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	FBXL16	Q8N461	479 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	C7orf43	Q8WVR3	580 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	INTS4	Q96HW7	963 aa	Known RBP	13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	RIOK1	Q9BRS2	568 aa	Known RBP	13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CHMP5	Q9NZZ3	219 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	CYP46A1	Q9Y6A2	500 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SCN9A	Q15858	1988 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PSME4	Q14997	1843 aa		13.6	□□□□□ -0.23
EIF4A1-218	ENST00000581544	PSMA5	P28066	241 aa		13.59	□□□□□ -0.23
EIF4A1-218	ENST00000581544	TOB2	Q14106	344 aa	Predicted RBP	13.59	□□□□□ -0.23
EIF4A1-218	ENST00000581544	SLC16A10	Q8TF71	515 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms