RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
CCDC47-203ENST00000580986 AOX1Q06278 1338 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 AACSQ86V21 672 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 FAM84BQ96KN1 310 aaPredicted RBP12.75□□□□□ -0.37
CCDC47-203ENST00000580986 MYH13Q9UKX3 1938 aa12.75□□□□□ -0.37
CCDC47-203ENST00000580986 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
CCDC47-203ENST00000580986 SNAP23O00161 211 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 APBB1O00213 710 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 MAP3K13O43283 966 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 AOC3Q16853 763 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 TXNRD3Q86VQ6 643 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 TDRD7Q8NHU6 1098 aaKnown RBP12.74□□□□□ -0.37
CCDC47-203ENST00000580986 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 OSBPL3Q9H4L5 887 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 CD209Q9NNX6 404 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
CCDC47-203ENST00000580986 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
CCDC47-203ENST00000580986 STAP2Q9UGK3 403 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
CCDC47-203ENST00000580986 COL4A5P29400 1685 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 CHD4Q14839 1912 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 POTEMA6NI47 508 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-203ENST00000580986 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-203ENST00000580986 KLRK1P26718 216 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 RASSF7Q02833 373 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 LARGE2Q8N3Y3 721 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 NEUROD6Q96NK8 337 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CCDC47-203ENST00000580986 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 FZD9O00144 591 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 ATP5JP18859 108 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 MX1P20591 662 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 ADORA1P30542 326 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 GYG1P46976 350 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 PRELPP51888 382 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 FKBP1AP62942 108 aaKnown RBP12.72□□□□□ -0.37
CCDC47-203ENST00000580986 GORABQ5T7V8 394 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
CCDC47-203ENST00000580986 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
CCDC47-203ENST00000580986 ECHDC1Q9NTX5 307 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
CCDC47-203ENST00000580986 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 ZNRF3Q9ULT6 936 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
CCDC47-203ENST00000580986 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 SCN9AQ15858 1988 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 ERC2O15083 957 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 ECE2O60344 883 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 PHKA1P46020 1223 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 BCAMP50895 628 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 TMED8Q6PL24 325 aaPredicted RBP12.71□□□□□ -0.37
CCDC47-203ENST00000580986 TICAM2Q86XR7 235 aa12.71□□□□□ -0.37
CCDC47-203ENST00000580986 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 G3V3G9 751 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
CCDC47-203ENST00000580986 MMP14P50281 582 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 PDE1AP54750 535 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 STRIP1Q5VSL9 837 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-203ENST00000580986 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
CCDC47-203ENST00000580986 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-203ENST00000580986 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 YDJCA8MPS7 323 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 MCAMP43121 646 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 RASGRF1Q13972 1273 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 ZGPATQ8N5A5 531 aaKnown RBP12.69□□□□□ -0.38
CCDC47-203ENST00000580986 WDR66Q8TBY9 1149 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
CCDC47-203ENST00000580986 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
CCDC47-203ENST00000580986 PDE4AP27815 886 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 TIE1P35590 1138 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
CCDC47-203ENST00000580986 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms