RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 PTPN5P54829 565 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 CAP1Q01518 475 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 COL9A2Q14055 689 aaPredicted RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 CCL15Q16663 113 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 TMC4Q7Z404 712 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 PLCD3Q8N3E9 789 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 AGBL3Q8NEM8 1001 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 FBXL18Q96ME1 805 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 EYA3Q99504 573 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 ARHGAP39Q9C0H5 1083 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 CRISPLD2Q9H0B8 497 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 DBNDD1Q9H9R9 158 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 ZCCHC17Q9NP64 241 aaKnown RBP3.28□□□□□ -1.88
CTC1-207ENST00000580299 MYOZ2Q9NPC6 264 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 ZNF318Q5VUA4 2279 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 EPG5Q9HCE0 2579 aa3.28□□□□□ -1.88
CTC1-207ENST00000580299 USP34Q70CQ2 3546 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ROCK2O75116 1388 aaKnown RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 HEG1Q9ULI3 1381 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ADCY3O60266 1144 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 TLR2O60603 784 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 BBOX1O75936 387 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 INHAP05111 366 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 USP17L8P0C7I0 530 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 OSBPP22059 807 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 GTF2A2P52657 109 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 FCGRTP55899 365 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ZNF280AP59817 542 aaPredicted RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 EVX2Q03828 476 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 SLC39A6Q13433 755 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 PDE3AQ14432 1141 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 CCDC85BQ15834 202 aaPredicted RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 WASHC4Q2M389 1173 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 PRAMEF18Q5VWM3 479 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 NBPF10Q6P3W6 841 aaKnown RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 SP8Q8IXZ3 490 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ANKRD13AQ8IZ07 590 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 OGFOD1Q8N543 542 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ZBTB38Q8NAP3 1195 aaPredicted RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 DIS3LQ8TF46 1054 aaKnown RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 PRRX2Q99811 253 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.27□□□□□ -1.89
CTC1-207ENST00000580299 GGNBP2Q9H3C7 697 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 PAK6Q9NQU5 681 aaPredicted RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 EMILIN1Q9Y6C2 1016 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ANKRD11Q6UB99 2663 aaPredicted RBP3.27□□□□□ -1.89
CTC1-207ENST00000580299 DOCK3Q8IZD9 2030 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ARAP2Q8WZ64 1704 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 COL4A1P02462 1669 aa3.27□□□□□ -1.89
CTC1-207ENST00000580299 ABCC4O15439 1325 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 SETXQ7Z333 2677 aaKnown RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 PI4K2BG5E9Z4 385 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 C6orf229H3BNL8 230 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 RIMBP2O15034 1052 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 VIL1P09327 827 aaKnown RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 BMP1P13497 986 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 ALADP13716 330 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 IGFBP4P22692 258 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 ID4P47928 161 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 MMP14P50281 582 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 NUBP1P53384 320 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 PRKCZQ05513 592 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 GRIN2CQ14957 1233 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 SKIV2LQ15477 1246 aaKnown RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 SUPT20HL1Q3ZLR7 823 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 RSBN1LQ6PCB5 846 aaPredicted RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 POTEEQ6S8J3 1075 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 DDX46Q7L014 1031 aaKnown RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 PXYLP1Q8TE99 480 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 ZKSCAN4Q969J2 545 aaPredicted RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 OPTNQ96CV9 577 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 CLMNQ96JQ2 1002 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 MFSD14AQ96MC6 490 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 NLRP3Q96P20 1036 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 PUS7Q96PZ0 661 aaKnown RBP3.26□□□□□ -1.89
CTC1-207ENST00000580299 IRF2BPLQ9H1B7 796 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 ZNF576Q9H609 170 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 C11orf16Q9NQ32 467 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 PPP2R3BQ9Y5P8 575 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 DNAH12Q6ZR08 3092 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 RLFQ13129 1914 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 PLXNA3P51805 1871 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 KMT2EQ8IZD2 1858 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 CHD6Q8TD26 2715 aa3.26□□□□□ -1.89
CTC1-207ENST00000580299 RTL9Q8NET4 1388 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 REV3LO60673 3130 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 FYB1O15117 783 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 SLC24A1O60721 1099 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 CETPP11597 493 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 CD44P16070 742 aaKnown RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 DNAJB2P25686 324 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 SHHQ15465 462 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 DOK7Q18PE1 504 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 IFNLR1Q8IU57 520 aaPredicted RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 ZNF579Q8NAF0 562 aaKnown RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 BRI3BPQ8WY22 251 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 TIFAQ96CG3 184 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 RNPC3Q96LT9 517 aaKnown RBP3.25□□□□□ -1.89
CTC1-207ENST00000580299 FMNL2Q96PY5 1086 aa3.25□□□□□ -1.89
CTC1-207ENST00000580299 PTPN18Q99952 460 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms