RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 WNK4Q96J92 1243 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 EFCC1Q9HA90 598 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 POTEFA5A3E0 1075 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 KCNJ4P48050 445 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ARMC5Q96C12 935 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 LAMB1P07942 1786 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
CDK5RAP3-216ENST00000579853 CUL9Q8IWT3 2517 aa15.65■□□□□ 0.1
CDK5RAP3-216ENST00000579853 IGF2BP3O00425 579 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDK5RAP3-216ENST00000579853 TMEM106CQ9BVX2 250 aa15.65■□□□□ 0.1
CDK5RAP3-216ENST00000579853 STK31Q9BXU1 1019 aa15.65■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ECM29Q5VYK3 1845 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 NEURL1BA8MQ27 555 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 H7C1W4 665 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ITGA6P23229 1130 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SP3Q02447 781 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 NBPF11Q86T75 865 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ANKRD13AQ8IZ07 590 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CLMNQ96JQ2 1002 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 PLA2G12BQ9BX93 195 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
CDK5RAP3-216ENST00000579853 FKBP1AP62942 108 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CRHR2Q13324 411 aa15.63■□□□□ 0.09
CDK5RAP3-216ENST00000579853 C15orf52Q6ZUT6 534 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
CDK5RAP3-216ENST00000579853 FZD1Q9UP38 647 aa15.63■□□□□ 0.09
CDK5RAP3-216ENST00000579853 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CWF19L2Q2TBE0 894 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ZNF804AQ7Z570 1209 aa15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
CDK5RAP3-216ENST00000579853 APAF1O14727 1248 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CSF1RP07333 972 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 KLRK1P26718 216 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 FXR1P51114 621 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CHRNDQ07001 517 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CFAP100Q494V2 611 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
CDK5RAP3-216ENST00000579853 USP2O75604 605 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 WDHD1O75717 1129 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 IL1R1P14778 569 aa15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 EN2P19622 333 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 NBPF12Q5TAG4 269 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CERS5Q8N5B7 392 aa15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ZNF333Q96JL9 665 aa15.6■□□□□ 0.09
CDK5RAP3-216ENST00000579853 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
CDK5RAP3-216ENST00000579853 GCKRQ14397 625 aa15.59■□□□□ 0.09
CDK5RAP3-216ENST00000579853 RASA3Q14644 834 aa15.59■□□□□ 0.09
CDK5RAP3-216ENST00000579853 SLC9C1Q4G0N8 1177 aa15.59■□□□□ 0.09
CDK5RAP3-216ENST00000579853 CLRN2A0PK11 232 aa15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 PRMT6Q96LA8 375 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 PTPN18Q99952 460 aa15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 ZFYVE28Q9HCC9 887 aa15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-216ENST00000579853 F8W031 263 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 GJA5P36382 358 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 GTF2A2P52657 109 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TAF1CQ15572 869 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 LINS1Q8NG48 757 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 IRS2Q9Y4H2 1338 aa15.57■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CASP7P55210 303 aa15.56■□□□□ 0.08
CDK5RAP3-216ENST00000579853 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-216ENST00000579853 MS4A4AQ96JQ5 239 aa15.56■□□□□ 0.08
CDK5RAP3-216ENST00000579853 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
CDK5RAP3-216ENST00000579853 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CCL15-CCL14A0A0B4J2E2 113 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TAF5LO75529 589 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 GNRH1P01148 92 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TNNI2P48788 182 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 KIF22Q14807 665 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CCL15Q16663 113 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 COLQQ9Y215 455 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 PCDHAC2Q9Y5I4 1007 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CACNA1FO60840 1977 aa15.55■□□□□ 0.08
CDK5RAP3-216ENST00000579853 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 PRMT2P55345 433 aa15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 FLIIQ13045 1269 aa15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 HELBQ8NG08 1087 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 ZCCHC17Q9NP64 241 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 ZNF70Q9UC06 446 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CSADQ9Y600 493 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms