RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CDC5LQ99459 802 aaKnown RBP21.48■■□□□ 1.03
SMPD3-211ENST00000568373 TMEM63CQ9P1W3 806 aa21.48■■□□□ 1.03
SMPD3-211ENST00000568373 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
SMPD3-211ENST00000568373 TRPC5Q9UL62 973 aaPredicted RBP21.47■■□□□ 1.03
SMPD3-211ENST00000568373 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 RASGRF1Q13972 1273 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
SMPD3-211ENST00000568373 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
SMPD3-211ENST00000568373 PDE6AP16499 860 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 CHRNDQ07001 517 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 NARFQ9UHQ1 456 aa21.46■■□□□ 1.03
SMPD3-211ENST00000568373 ZNF532Q9HCE3 1301 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 DOCK2Q92608 1830 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 PFKFB2O60825 505 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 GADD45BO75293 160 aaPredicted RBP21.45■■□□□ 1.02
SMPD3-211ENST00000568373 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 TBC1D9BQ66K14 1250 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 COL4A1P02462 1669 aa21.45■■□□□ 1.02
SMPD3-211ENST00000568373 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 HAND2P61296 217 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 SCRN1Q12765 414 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 CDC37L1Q7L3B6 337 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 FBXL16Q8N461 479 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 CCNL1Q9UK58 526 aaPredicted RBP21.44■■□□□ 1.02
SMPD3-211ENST00000568373 WWC3Q9ULE0 1092 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 BICDL1Q6ZP65 573 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 C3orf67Q6ZVT6 689 aa21.44■■□□□ 1.02
SMPD3-211ENST00000568373 LLPHQ9BRT6 129 aaKnown RBP21.44■■□□□ 1.02
SMPD3-211ENST00000568373 GNPATO15228 680 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 JAK2O60674 1132 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 APOBRQ0VD83 1088 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 SLC10A5Q5PT55 438 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 ANKRD18AQ8IVF6 992 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 DNM1Q05193 864 aaKnown RBP21.43■■□□□ 1.02
SMPD3-211ENST00000568373 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
SMPD3-211ENST00000568373 ZNF213O14771 459 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 FIBPO43427 364 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 BCAMP50895 628 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 MAP3K12Q12852 859 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 SMARCC2Q8TAQ2 1214 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
SMPD3-211ENST00000568373 NYXQ9GZU5 481 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 LY75O60449 1722 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
SMPD3-211ENST00000568373 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
SMPD3-211ENST00000568373 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 ZNF274Q96GC6 653 aaPredicted RBP21.41■■□□□ 1.02
SMPD3-211ENST00000568373 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
SMPD3-211ENST00000568373 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 TAF1LQ8IZX4 1826 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 ZPR1O75312 459 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 UBE2HP62256 183 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
SMPD3-211ENST00000568373 BSDC1Q9NW68 430 aaPredicted RBP21.41■■□□□ 1.02
SMPD3-211ENST00000568373 RTCBQ9Y3I0 505 aaKnown RBP21.41■■□□□ 1.02
SMPD3-211ENST00000568373 EVCP57679 992 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 MB21D2Q8IYB1 491 aaPredicted RBP21.4■■□□□ 1.02
SMPD3-211ENST00000568373 NCOA7Q8NI08 942 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 TAF1P21675 1872 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 SYCE3A1L190 88 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 MCM5P33992 734 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 LRSAM1Q6UWE0 723 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 FERMT3Q86UX7 667 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 AIDAQ96BJ3 306 aa21.4■■□□□ 1.02
SMPD3-211ENST00000568373 STRBPQ96SI9 672 aaKnown RBP21.4■■□□□ 1.02
SMPD3-211ENST00000568373 PDIA3P30101 505 aaKnown RBP21.39■■□□□ 1.01
SMPD3-211ENST00000568373 NSUN7Q8NE18 718 aaKnown RBP21.39■■□□□ 1.01
SMPD3-211ENST00000568373 ONECUT3O60422 494 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 RALYLQ86SE5 291 aaKnown RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 SEPT12Q8IYM1 358 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 WDR19Q8NEZ3 1342 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 PRC1O43663 620 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 CTDNEP1O95476 244 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 APPP05067 770 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 NASPP49321 788 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 KRT85P78386 507 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 HMGN5P82970 282 aaKnown RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 UBE4AQ14139 1066 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 ZNF772Q68DY9 489 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 NBPF5PQ86XG9 351 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-211ENST00000568373 FAM184AQ8NB25 1140 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 CHMP4CQ96CF2 233 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 NBPF3Q9H094 633 aa21.38■■□□□ 1.01
SMPD3-211ENST00000568373 ZNF804BA4D1E1 1349 aa21.37■■□□□ 1.01
SMPD3-211ENST00000568373 AMIGO3Q86WK7 504 aa21.37■■□□□ 1.01
SMPD3-211ENST00000568373 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
SMPD3-211ENST00000568373 ALX1Q15699 326 aa21.36■■□□□ 1.01
SMPD3-211ENST00000568373 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
SMPD3-211ENST00000568373 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
SMPD3-211ENST00000568373 MINPP1Q9UNW1 487 aa21.36■■□□□ 1.01
SMPD3-211ENST00000568373 ZMYM6O95789 1325 aa21.36■■□□□ 1.01
SMPD3-211ENST00000568373 PTPDC1A2A3K4 754 aa21.36■■□□□ 1.01
SMPD3-211ENST00000568373 PHF14O94880 888 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms