RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 GPR101Q96P66 508 aaPredicted RBP15.51■□□□□ 0.07
CLK3-214ENST00000564096 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 TAOK3Q9H2K8 898 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
CLK3-214ENST00000564096 SNRKQ9NRH2 765 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 COL1A1P02452 1464 aaPredicted RBP15.51■□□□□ 0.07
CLK3-214ENST00000564096 ZFYP08048 801 aaPredicted RBP15.5■□□□□ 0.07
CLK3-214ENST00000564096 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
CLK3-214ENST00000564096 CD209Q9NNX6 404 aa15.5■□□□□ 0.07
CLK3-214ENST00000564096 WTIPA6NIX2 430 aaPredicted RBP15.49■□□□□ 0.07
CLK3-214ENST00000564096 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 IL1R1P14778 569 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 MAP3K12Q12852 859 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 CHAF1AQ13111 956 aaPredicted RBP15.49■□□□□ 0.07
CLK3-214ENST00000564096 TMED8Q6PL24 325 aaPredicted RBP15.49■□□□□ 0.07
CLK3-214ENST00000564096 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
CLK3-214ENST00000564096 WDR66Q8TBY9 1149 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 TBC1D22AQ8WUA7 517 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 BACH2Q9BYV9 841 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 IQSEC3Q9UPP2 1182 aaPredicted RBP15.49■□□□□ 0.07
CLK3-214ENST00000564096 NDUFB9Q9Y6M9 179 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 AK9Q5TCS8 1911 aa15.49■□□□□ 0.07
CLK3-214ENST00000564096 SALL1Q9NSC2 1324 aa15.48■□□□□ 0.07
CLK3-214ENST00000564096 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
CLK3-214ENST00000564096 REC8O95072 547 aa15.48■□□□□ 0.07
CLK3-214ENST00000564096 CHMLP26374 656 aa15.48■□□□□ 0.07
CLK3-214ENST00000564096 SPTY2D1Q68D10 685 aaPredicted RBP15.48■□□□□ 0.07
CLK3-214ENST00000564096 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
CLK3-214ENST00000564096 EDC3Q96F86 508 aaKnown RBP15.48■□□□□ 0.07
CLK3-214ENST00000564096 WWC3Q9ULE0 1092 aa15.48■□□□□ 0.07
CLK3-214ENST00000564096 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 MAST2Q6P0Q8 1798 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
CLK3-214ENST00000564096 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
CLK3-214ENST00000564096 SYT17Q9BSW7 474 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 ANTXR1Q9H6X2 564 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 LRP2BPQ9P2M1 347 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 MYH13Q9UKX3 1938 aa15.47■□□□□ 0.07
CLK3-214ENST00000564096 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 RNF113AO15541 343 aaKnown RBP15.46■□□□□ 0.07
CLK3-214ENST00000564096 ECE2O60344 883 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 MFAP1P55081 439 aaKnown RBP15.46■□□□□ 0.07
CLK3-214ENST00000564096 AOC3Q16853 763 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 NIM1KQ8IY84 436 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 LARGE2Q8N3Y3 721 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 PIH1D3Q9NQM4 214 aaKnown RBP15.46■□□□□ 0.07
CLK3-214ENST00000564096 ABCF2Q9UG63 623 aa15.46■□□□□ 0.07
CLK3-214ENST00000564096 IARSP41252 1262 aaKnown RBP15.45■□□□□ 0.06
CLK3-214ENST00000564096 CWC27Q6UX04 472 aaKnown RBP15.45■□□□□ 0.06
CLK3-214ENST00000564096 ERICH6Q7L0X2 663 aa15.45■□□□□ 0.06
CLK3-214ENST00000564096 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
CLK3-214ENST00000564096 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
CLK3-214ENST00000564096 ESYT1Q9BSJ8 1104 aa15.45■□□□□ 0.06
CLK3-214ENST00000564096 RAI14Q9P0K7 980 aa15.45■□□□□ 0.06
CLK3-214ENST00000564096 AKAP11Q9UKA4 1901 aa15.45■□□□□ 0.06
CLK3-214ENST00000564096 FAM205AQ6ZU69 1335 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
CLK3-214ENST00000564096 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
CLK3-214ENST00000564096 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 DOK7Q18PE1 504 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 KIAA1211Q6ZU35 1233 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 APPBP2Q92624 585 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
CLK3-214ENST00000564096 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 DOCK2Q92608 1830 aa15.44■□□□□ 0.06
CLK3-214ENST00000564096 MAST3O60307 1309 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 SGSM2O43147 1006 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
CLK3-214ENST00000564096 PDE6AP16499 860 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 ADD2P35612 726 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 GSTO1P78417 241 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 MFSD14BQ5SR56 506 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 JDP2Q8WYK2 163 aa15.43■□□□□ 0.06
CLK3-214ENST00000564096 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 A0A0D9SFI3 127 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 NFKBIEO00221 500 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 EPB41L2O43491 1005 aaKnown RBP15.42■□□□□ 0.06
CLK3-214ENST00000564096 FKBP1AP62942 108 aaKnown RBP15.42■□□□□ 0.06
CLK3-214ENST00000564096 GTF2IP78347 998 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 MCMDC2Q4G0Z9 681 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 ZMYM1Q5SVZ6 1142 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 NAA16Q6N069 864 aaPredicted RBP15.42■□□□□ 0.06
CLK3-214ENST00000564096 SLF2Q8IX21 1173 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 MAGEB6Q8N7X4 407 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 ANO2Q9NQ90 1003 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 MYO3BQ8WXR4 1341 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 ZNF532Q9HCE3 1301 aa15.42■□□□□ 0.06
CLK3-214ENST00000564096 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
CLK3-214ENST00000564096 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
CLK3-214ENST00000564096 MCCP23508 829 aa15.41■□□□□ 0.06
CLK3-214ENST00000564096 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
CLK3-214ENST00000564096 TTLL5Q6EMB2 1281 aa15.41■□□□□ 0.06
CLK3-214ENST00000564096 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms