RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PRPF40AO75400 957 aaKnown RBP8.36□□□□□ -1.07
USP8-218ENST00000561330 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
USP8-218ENST00000561330 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
USP8-218ENST00000561330 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
USP8-218ENST00000561330 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
USP8-218ENST00000561330 ARL4DP49703 201 aa8.35□□□□□ -1.07
USP8-218ENST00000561330 MFAP1P55081 439 aaKnown RBP8.35□□□□□ -1.07
USP8-218ENST00000561330 KLHL23Q8NBE8 558 aa8.35□□□□□ -1.07
USP8-218ENST00000561330 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
USP8-218ENST00000561330 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
USP8-218ENST00000561330 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
USP8-218ENST00000561330 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
USP8-218ENST00000561330 C9orf172C9J069 976 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 GIPC1O14908 333 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 SELPP16109 830 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 ITPKAP23677 461 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 LENG1Q96BZ8 264 aaPredicted RBP8.34□□□□□ -1.07
USP8-218ENST00000561330 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
USP8-218ENST00000561330 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
USP8-218ENST00000561330 CD68P34810 354 aaPredicted RBP8.33□□□□□ -1.08
USP8-218ENST00000561330 NRG1Q02297 640 aaPredicted RBP8.33□□□□□ -1.08
USP8-218ENST00000561330 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
USP8-218ENST00000561330 PCDH1Q08174 1060 aa8.33□□□□□ -1.08
USP8-218ENST00000561330 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
USP8-218ENST00000561330 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
USP8-218ENST00000561330 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
USP8-218ENST00000561330 USP21Q9UK80 565 aa8.33□□□□□ -1.08
USP8-218ENST00000561330 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 SOX1O00570 391 aaPredicted RBP8.32□□□□□ -1.08
USP8-218ENST00000561330 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
USP8-218ENST00000561330 GNA15P30679 374 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 CHRNA4P43681 627 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 FCGRTP55899 365 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
USP8-218ENST00000561330 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 DTHD1Q6ZMT9 781 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 FBXO33Q7Z6M2 555 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
USP8-218ENST00000561330 SRCIN1Q9C0H9 1055 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
USP8-218ENST00000561330 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
USP8-218ENST00000561330 RPS26P11Q5JNZ5 115 aaPredicted RBP8.31□□□□□ -1.08
USP8-218ENST00000561330 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
USP8-218ENST00000561330 MRPL18Q9H0U6 180 aaKnown RBP8.31□□□□□ -1.08
USP8-218ENST00000561330 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
USP8-218ENST00000561330 TM4SF5O14894 197 aa8.3□□□□□ -1.08
USP8-218ENST00000561330 ZNF423Q2M1K9 1284 aa8.3□□□□□ -1.08
USP8-218ENST00000561330 FOXD4L6Q3SYB3 417 aaPredicted RBP8.3□□□□□ -1.08
USP8-218ENST00000561330 HGSNATQ68CP4 663 aa8.3□□□□□ -1.08
USP8-218ENST00000561330 FOXD4L3Q6VB84 417 aaPredicted RBP8.3□□□□□ -1.08
USP8-218ENST00000561330 DDX54Q8TDD1 881 aaKnown RBP8.3□□□□□ -1.08
USP8-218ENST00000561330 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
USP8-218ENST00000561330 DDX3YO15523 660 aaKnown RBP8.29□□□□□ -1.08
USP8-218ENST00000561330 GSTT1P30711 240 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 XPCQ01831 940 aaPredicted RBP8.29□□□□□ -1.08
USP8-218ENST00000561330 GSTM4Q03013 218 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 BCL2L13Q9BXK5 485 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 KCNK4Q9NYG8 393 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 PARP2Q9UGN5 583 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 AKAP2Q9Y2D5 859 aa8.29□□□□□ -1.08
USP8-218ENST00000561330 B3GALT4O96024 378 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 ITGB2P05107 769 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 EIF4BP23588 611 aaKnown RBP8.28□□□□□ -1.08
USP8-218ENST00000561330 NLRP12P59046 1061 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 ADGRE1Q14246 886 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 DUOXA2Q1HG44 320 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 GPAT2Q6NUI2 795 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
USP8-218ENST00000561330 FAM8A1Q9UBU6 413 aa8.28□□□□□ -1.08
USP8-218ENST00000561330 ADAM11O75078 769 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 TAGLNQ01995 201 aaKnown RBP8.27□□□□□ -1.09
USP8-218ENST00000561330 PSMD2Q13200 908 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 ZNF326Q5BKZ1 582 aaKnown RBP8.27□□□□□ -1.09
USP8-218ENST00000561330 ACAD11Q709F0 780 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 TMEM130Q8N3G9 435 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 C3orf58Q8NDZ4 430 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 AK5Q9Y6K8 562 aa8.27□□□□□ -1.09
USP8-218ENST00000561330 IGHA1P01876 353 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 GATA4P43694 442 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 FAAP100Q0VG06 881 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 GIPC2Q8TF65 315 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 AKTIPQ9H8T0 292 aa8.26□□□□□ -1.09
USP8-218ENST00000561330 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
USP8-218ENST00000561330 MSTNO14793 375 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 WISP1O95388 367 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 USP17L7P0C7H9 530 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 IREB2P48200 963 aaKnown RBP8.25□□□□□ -1.09
USP8-218ENST00000561330 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms