RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 RGS22Q8NE09 1264 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TNNQ9UQP3 1299 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CHUKO15111 745 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TSNAXIP1Q2TAA8 658 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 KIF1BPQ96EK5 621 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CCNI2Q6ZMN8 369 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 MGARPQ8TDB4 240 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 UBLCP1Q8WVY7 318 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CNNM1Q9NRU3 951 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TTC16Q8NEE8 873 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 SAR1BQ9Y6B6 198 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 KIF1CO43896 1103 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 XPO4Q9C0E2 1151 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NBPF20Q3BBV1 942 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CACNA2D3Q8IZS8 1091 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC92Q53HC0 331 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NSRP1Q9H0G5 558 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 SPATS2Q86XZ4 545 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NOX5Q96PH1 765 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 A0A087WZG4 1122 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TMTC2Q8N394 836 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 UHMK1Q8TAS1 419 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ASCC2Q9H1I8 757 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 RUFY3Q7L099 469 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ANKRD13CQ8N6S4 541 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ELAC2Q9BQ52 826 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 MLKLQ8NB16 471 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 FAM114A2Q9NRY5 505 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 PHLDB2Q86SQ0 1253 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 TSC22D3Q99576 134 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CABP5Q9NP86 173 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 EEA1Q15075 1411 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 SBNO2Q9Y2G9 1366 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 SPECC1L-ADORA2AF8WAN1 911 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CMA1P23946 247 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 MAP3K9P80192 1104 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 ANKRD42Q8N9B4 389 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 RGS16O15492 202 aaPredicted RBP4.15□□□□□ -1.74
ATXN3-248ENST00000558190 FBXO41Q8TF61 875 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 ACTN4O43707 911 aaKnown RBP4.15□□□□□ -1.74
ATXN3-248ENST00000558190 MGEA5O60502 916 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 GSTA5Q7RTV2 222 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 IDEP14735 1019 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC65Q8IXS2 484 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 RCOR1Q9UKL0 485 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 EVC2Q86UK5 1308 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 RASSF10A6NK89 507 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 AMOTQ4VCS5 1084 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CHST3Q7LGC8 479 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 RNF168Q8IYW5 571 aaPredicted RBP4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CDC23Q9UJX2 597 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 EIF4E1BA6NMX2 242 aaKnown RBP4.15□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC25Q86WR0 208 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 BRF1Q92994 677 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 SLC26A6Q9BXS9 759 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 ANKRD24Q8TF21 1146 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 ALG1Q9BT22 464 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 AKAP2Q9Y2D5 859 aa4.15□□□□□ -1.74
ATXN3-248ENST00000558190 PHLDB1Q86UU1 1377 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 COBLO75128 1261 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 EP400NLQ6ZTU2 488 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 IQUBQ8NA54 791 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 SPTY2D1Q68D10 685 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CAPRIN2Q6IMN6 1127 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC63Q8NA47 563 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 PFDN4Q9NQP4 134 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 TRIM21P19474 475 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 FLIIQ13045 1269 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 SF3B2Q13435 895 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 KCNV2Q8TDN2 545 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 ARHGEF2Q92974 986 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 EPB41L5Q9HCM4 733 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 MAPK8IP1Q9UQF2 711 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC174Q6PII3 467 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 KCNG4Q8TDN1 519 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 TRPA1O75762 1119 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 ST5P78524 1137 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 SYCP3Q8IZU3 236 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 NSFL1CQ9UNZ2 370 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 FERP16591 822 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 EFCAB2Q5VUJ9 269 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 DHX58Q96C10 678 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 IRX1P78414 480 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 YIPF3Q9GZM5 350 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 AKNAQ7Z591 1439 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 RANBP6O60518 1105 aaKnown RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 AK2P54819 239 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC144CPQ8IYA2 1237 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 HAND2P61296 217 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 SLC7A5Q01650 507 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CFAP221Q4G0U5 840 aa4.15□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC85AQ96PX6 553 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-248ENST00000558190 TMEM132AQ24JP5 1023 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 ANO1Q5XXA6 986 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SPINK5Q9NQ38 1064 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TTF1Q15361 905 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PARP9Q8IXQ6 854 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms