RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 APLP1P51693 650 aa11.08□□□□□ -0.64
SPG11-207ENST00000558138 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
SPG11-207ENST00000558138 FAM84BQ96KN1 310 aaPredicted RBP11.08□□□□□ -0.64
SPG11-207ENST00000558138 ZNF408Q9H9D4 720 aa11.08□□□□□ -0.64
SPG11-207ENST00000558138 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 SASH1O94885 1247 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 POLA2Q14181 598 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 HSP90AB4PQ58FF6 505 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 ERC1Q8IUD2 1116 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 TDRD7Q8NHU6 1098 aaKnown RBP11.07□□□□□ -0.64
SPG11-207ENST00000558138 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 TBC1D22AQ8WUA7 517 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 EXOC6BQ9Y2D4 811 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
SPG11-207ENST00000558138 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 MYO1BO43795 1136 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 FGFR2P21802 821 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 ADORA1P30542 326 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 TIMM10P62072 90 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 SCARF1Q14162 830 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 DLGAP5Q15398 846 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
SPG11-207ENST00000558138 FBXO33Q7Z6M2 555 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 RPAP2Q8IXW5 612 aaPredicted RBP11.06□□□□□ -0.64
SPG11-207ENST00000558138 GLIS2Q9BZE0 524 aaPredicted RBP11.06□□□□□ -0.64
SPG11-207ENST00000558138 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
SPG11-207ENST00000558138 ABT1Q9ULW3 272 aaKnown RBP11.06□□□□□ -0.64
SPG11-207ENST00000558138 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
SPG11-207ENST00000558138 EGFRP00533 1210 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 PHKA1P46020 1223 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
SPG11-207ENST00000558138 ZNF280AP59817 542 aaPredicted RBP11.05□□□□□ -0.64
SPG11-207ENST00000558138 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
SPG11-207ENST00000558138 CCDC158Q5M9N0 1113 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 TTC39AQ5SRH9 613 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
SPG11-207ENST00000558138 CDC37L1Q7L3B6 337 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
SPG11-207ENST00000558138 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 ZBTB40Q9NUA8 1239 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 FAM205AQ6ZU69 1335 aa11.05□□□□□ -0.64
SPG11-207ENST00000558138 ZNF609O15014 1411 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 ADAMTSL1Q8N6G6 1762 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 TMEM88BA6NKF7 163 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 TRAF5O00463 557 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 MMP14P50281 582 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 HTRA3P83110 453 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 CFAP100Q494V2 611 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 CCDC102BQ68D86 513 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 WDR66Q8TBY9 1149 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 GMLQ99445 158 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 MAST3O60307 1309 aa11.04□□□□□ -0.64
SPG11-207ENST00000558138 ADM5C9JUS6 153 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 SEMA3EO15041 775 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
SPG11-207ENST00000558138 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 AACSQ86V21 672 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
SPG11-207ENST00000558138 CERS5Q8N5B7 392 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
SPG11-207ENST00000558138 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
SPG11-207ENST00000558138 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
SPG11-207ENST00000558138 WNT10BO00744 389 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 NF2P35240 595 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 GRM1Q13255 1194 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 DZIP1Q86YF9 867 aaKnown RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 CCDC8Q9H0W5 538 aaPredicted RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 SUPT16HQ9Y5B9 1047 aaKnown RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
SPG11-207ENST00000558138 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
SPG11-207ENST00000558138 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 RAB11FIP3O75154 756 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 CRKP46108 304 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 FMR1Q06787 632 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPG11-207ENST00000558138 RASGRF1Q13972 1273 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 TTLL12Q14166 644 aaPredicted RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 SPTY2D1Q68D10 685 aaPredicted RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 RHPN1Q8TCX5 695 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms