RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CICQ96RK0 1608 aaPredicted RBP6.08□□□□□ -1.44
PROM1-220ENST00000540805 A0A087WWV3 80 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 SLU7O95391 586 aaKnown RBP6.08□□□□□ -1.44
PROM1-220ENST00000540805 ST3GAL1Q11201 340 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 GRM1Q13255 1194 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 POLA2Q14181 598 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 ME3Q16798 604 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 LRRC8AQ8IWT6 810 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 NECAB1Q8N987 351 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 SSH3Q8TE77 659 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 KIF1BPQ96EK5 621 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.08□□□□□ -1.44
PROM1-220ENST00000540805 RREB1Q92766 1687 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 KIF2AO00139 706 aaPredicted RBP6.08□□□□□ -1.44
PROM1-220ENST00000540805 GTF2A1P52655 376 aaPredicted RBP6.08□□□□□ -1.44
PROM1-220ENST00000540805 ADCK5Q3MIX3 580 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 FAM173BQ6P4H8 233 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 ZSWIM6Q9HCJ5 1215 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.08□□□□□ -1.44
PROM1-220ENST00000540805 SLAIN2Q9P270 581 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 UTYO14607 1347 aa6.08□□□□□ -1.44
PROM1-220ENST00000540805 ANXA1P04083 346 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 CHMP4BP1P59074 171 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 KRBA2Q6ZNG9 492 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 NYAP1Q6ZVC0 841 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 ACSBG1Q96GR2 724 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 MRFAP1L1Q96HT8 127 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 EXOC5O00471 708 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 SKILP12757 684 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 CCDC57Q2TAC2 916 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 TSGA10IPQ3SY00 556 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 FOXR1Q6PIV2 292 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 SARM1Q6SZW1 724 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 PPP1R42Q7Z4L9 355 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 CEP89Q96ST8 783 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 PLEKHA4Q9H4M7 779 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 ECM2O94769 699 aaPredicted RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 NBPF7P0C2Y1 421 aaPredicted RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 PTH1RQ03431 593 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 SLC52A2Q9HAB3 445 aa6.07□□□□□ -1.44
PROM1-220ENST00000540805 TFIP11Q9UBB9 837 aaKnown RBP6.07□□□□□ -1.44
PROM1-220ENST00000540805 CCDC69A6NI79 296 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 NR1I2O75469 434 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 SEC31AO94979 1220 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 PSMA5P28066 241 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 SLC20A2Q08357 652 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 HSP90AB4PQ58FF6 505 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 SMARCE1Q969G3 411 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 TMOD3Q9NYL9 352 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 TPCN1Q9ULQ1 816 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 TTC41PQ6P2S7 1318 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 BECN2A8MW95 431 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 SRGAP3O43295 1099 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 CYP2C19P33261 490 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 ERCC6LQ2NKX8 1250 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 KCNB2Q92953 911 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 TSPYL1Q9H0U9 437 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 WDR17Q8IZU2 1322 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 JCADQ9P266 1359 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 ZPR1O75312 459 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 NKX1-1Q15270 411 aaPredicted RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 ANKRD1Q15327 319 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 STX1AQ16623 288 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 FILIP1Q7Z7B0 1213 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 CCAR2Q8N163 923 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 CEP126Q9P2H0 1117 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 SLIT2O94813 1529 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 GOLGB1Q14789 3259 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 MYO1CO00159 1063 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 IDH1O75874 414 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 CCZ1BP86790 482 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 CCZ1P86791 482 aaPredicted RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 IQCB1Q15051 598 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 WDR78Q5VTH9 848 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 CREB3L3Q68CJ9 461 aa6.06□□□□□ -1.44
PROM1-220ENST00000540805 LARP1Q6PKG0 1096 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 RBM8AQ9Y5S9 174 aaKnown RBP6.06□□□□□ -1.44
PROM1-220ENST00000540805 USP42Q9H9J4 1324 aaKnown RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 CASZ1Q86V15 1759 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 CTAGE5O15320 804 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 STARD3NLO95772 234 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 IGKV5-2P06315 115 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 PDE6BP35913 854 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 PIP4K2AP48426 406 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 GSDMDP57764 484 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 SNW1Q13573 536 aaKnown RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 ZNF790Q6PG37 636 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 FAM43BQ6ZT52 329 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 C11orf57Q6ZUT1 292 aaPredicted RBP6.05□□□□□ -1.44
PROM1-220ENST00000540805 MTX1Q13505 466 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 NECTIN1Q15223 517 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 TEX35Q5T0J7 233 aa6.05□□□□□ -1.44
PROM1-220ENST00000540805 BLOC1S2Q6QNY1 142 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms