RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
LDHA-216ENST00000538451 DALRD3Q5D0E6 543 aaKnown RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 PRPF40BQ6NWY9 871 aaKnown RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 C15orf52Q6ZUT6 534 aaKnown RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 FSD1Q9BTV5 496 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 ZC3H12CQ9C0D7 883 aaKnown RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 PAG1Q9NWQ8 432 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 KIAA1551Q9HCM1 1747 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 ANKRD31Q8N7Z5 1873 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 REC8O95072 547 aa12.21□□□□□ -0.45
LDHA-216ENST00000538451 ZFYP08048 801 aaPredicted RBP12.21□□□□□ -0.45
LDHA-216ENST00000538451 CHRNA5P30532 468 aa12.21□□□□□ -0.45
LDHA-216ENST00000538451 WASHC4Q2M389 1173 aa12.21□□□□□ -0.45
LDHA-216ENST00000538451 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.45
LDHA-216ENST00000538451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.21□□□□□ -0.45
LDHA-216ENST00000538451 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.46
LDHA-216ENST00000538451 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.46
LDHA-216ENST00000538451 ADORA1P30542 326 aa12.2□□□□□ -0.46
LDHA-216ENST00000538451 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
LDHA-216ENST00000538451 GPSM2P81274 684 aa12.2□□□□□ -0.46
LDHA-216ENST00000538451 CCDC93Q567U6 631 aa12.2□□□□□ -0.46
LDHA-216ENST00000538451 TMED8Q6PL24 325 aaPredicted RBP12.2□□□□□ -0.46
LDHA-216ENST00000538451 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
LDHA-216ENST00000538451 GOLIM4O00461 696 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 PHKA1P46020 1223 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 BCAMP50895 628 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 SPTY2D1Q68D10 685 aaPredicted RBP12.19□□□□□ -0.46
LDHA-216ENST00000538451 ARHGAP27Q6ZUM4 889 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 KBTBD3Q8NAB2 608 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 MED23Q9ULK4 1368 aa12.19□□□□□ -0.46
LDHA-216ENST00000538451 PDS5AQ29RF7 1337 aaKnown RBP12.19□□□□□ -0.46
LDHA-216ENST00000538451 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
LDHA-216ENST00000538451 GYG1P46976 350 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 MAP3K12Q12852 859 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 FBXO33Q7Z6M2 555 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 WDR66Q8TBY9 1149 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
LDHA-216ENST00000538451 COA1Q9GZY4 146 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 TAF1P21675 1872 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
LDHA-216ENST00000538451 ARAP2Q8WZ64 1704 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 RAD50Q92878 1312 aa12.18□□□□□ -0.46
LDHA-216ENST00000538451 STK25O00506 426 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
LDHA-216ENST00000538451 MCCP23508 829 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 CHMLP26374 656 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 MCAMP43121 646 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 ZAP70P43403 619 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 LRP2BPQ9P2M1 347 aa12.17□□□□□ -0.46
LDHA-216ENST00000538451 C21orf2O43822 256 aa12.16□□□□□ -0.46
LDHA-216ENST00000538451 RASGRF1Q13972 1273 aa12.16□□□□□ -0.46
LDHA-216ENST00000538451 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
LDHA-216ENST00000538451 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
LDHA-216ENST00000538451 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
LDHA-216ENST00000538451 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
LDHA-216ENST00000538451 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 SNAP23O00161 211 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
LDHA-216ENST00000538451 IDH1O75874 414 aaKnown RBP12.15□□□□□ -0.46
LDHA-216ENST00000538451 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
LDHA-216ENST00000538451 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 PSMD1Q99460 953 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 RTFDC1Q9BY42 306 aaPredicted RBP12.15□□□□□ -0.46
LDHA-216ENST00000538451 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 HELLSQ9NRZ9 838 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 POLLQ9UGP5 575 aa12.15□□□□□ -0.46
LDHA-216ENST00000538451 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
LDHA-216ENST00000538451 CYP2E1P05181 493 aaPredicted RBP12.14□□□□□ -0.47
LDHA-216ENST00000538451 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
LDHA-216ENST00000538451 IL1R1P14778 569 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
LDHA-216ENST00000538451 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 A0A1B0GUL6 1792 aa12.14□□□□□ -0.47
LDHA-216ENST00000538451 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 GSTO1P78417 241 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 UBE3CQ15386 1083 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
LDHA-216ENST00000538451 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
LDHA-216ENST00000538451 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
LDHA-216ENST00000538451 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms