RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MYO1BO43795 1136 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 RAB11FIP3O75154 756 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 UQCRFS1P1P0C7P4 283 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 HSPA6P17066 643 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 BCAMP50895 628 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 APLP1P51693 650 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 RBM5P52756 815 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZNF280AP59817 542 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 CCDC158Q5M9N0 1113 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 RBM26Q5T8P6 1007 aaKnown RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 SULF1Q8IWU6 871 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZGPATQ8N5A5 531 aaKnown RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 WDR66Q8TBY9 1149 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 DCPSQ96C86 337 aaKnown RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 MYOZ2Q9NPC6 264 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 GPR108Q9NPR9 543 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 DENND2AQ9ULE3 1009 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 IQSEC3Q9UPP2 1182 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 NOP58Q9Y2X3 529 aaKnown RBP6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 FAM205AQ6ZU69 1335 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 IRS2Q9Y4H2 1338 aa6.64□□□□□ -1.35
HMGB1P40-201ENST00000525121 A0A1B0GUL6 1792 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 F8W031 263 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 APBB1O00213 710 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 POTEIP0CG38 1075 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 POTEJP0CG39 1038 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 MAP1SQ66K74 1059 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 CCDC102BQ68D86 513 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 CDC37L1Q7L3B6 337 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 SAMD7Q7Z3H4 446 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 CNTROBQ8N137 903 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 CLASRPQ8N2M8 674 aaKnown RBP6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 TRPM4Q8TD43 1214 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 KIF1BPQ96EK5 621 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 XAGE2Q96GT9 111 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 GMLQ99445 158 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 MXD3Q9BW11 206 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 BCL11AQ9H165 835 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 GGA3Q9NZ52 723 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 TTF2Q9UNY4 1162 aaKnown RBP6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 EXOC6BQ9Y2D4 811 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
HMGB1P40-201ENST00000525121 PDS5AQ29RF7 1337 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 SHTN1A0MZ66 631 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 LDHBP07195 334 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 IFIT2P09913 472 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 ADORA1P30542 326 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 PHKA1P46020 1223 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 TIMM10P62072 90 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 SPTY2D1Q68D10 685 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 KRT26Q7Z3Y9 468 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 AACSQ86V21 672 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 DZIP1Q86YF9 867 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 APOBEC3FQ8IUX4 373 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 SLF2Q8IX21 1173 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 TEKT1Q969V4 418 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 LRRCC1Q9C099 1032 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 TMOD2Q9NZR1 351 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 SERPINA10Q9UK55 444 aa6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 SUPT16HQ9Y5B9 1047 aaKnown RBP6.62□□□□□ -1.35
HMGB1P40-201ENST00000525121 NF2P35240 595 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 GSTO1P78417 241 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 HDLBPQ00341 1268 aaKnown RBP6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 TNFAIP1Q13829 316 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 RASGRF1Q13972 1273 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 SCARF1Q14162 830 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 CFAP100Q494V2 611 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 CERS5Q8N5B7 392 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 SPATA5Q8NB90 893 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 IL1RAPL2Q9NP60 686 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 ABCF2Q9UG63 623 aa6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 ABT1Q9ULW3 272 aaKnown RBP6.61□□□□□ -1.35
HMGB1P40-201ENST00000525121 PSME4Q14997 1843 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 SALL1Q9NSC2 1324 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 ARAP2Q8WZ64 1704 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 SPDYE2BA6NHP3 402 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 WNT10BO00744 389 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZBTB22O15209 634 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 CELF2O95319 508 aaKnown RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 EGFRP00533 1210 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 SPDYE6P0CI01 402 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 ARID4AP29374 1257 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 CRKP46108 304 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 TNNI2P48788 182 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 HIRAP54198 1017 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 USP48Q86UV5 1035 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 SIRT2Q8IXJ6 389 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms