RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 TSC1Q92574 1164 aa7.84□□□□□ -1.15
LIN7C-202ENST00000524596 EIF3CQ99613 913 aaKnown RBP7.84□□□□□ -1.15
LIN7C-202ENST00000524596 OSBPL10Q9BXB5 764 aa7.84□□□□□ -1.15
LIN7C-202ENST00000524596 PPP1R9AQ9ULJ8 1098 aa7.84□□□□□ -1.15
LIN7C-202ENST00000524596 MORC2Q9Y6X9 1032 aaPredicted RBP7.84□□□□□ -1.15
LIN7C-202ENST00000524596 CUX2O14529 1486 aa7.84□□□□□ -1.15
LIN7C-202ENST00000524596 NEK10Q6ZWH5 1172 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 MAATS1Q7Z4T9 603 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 RSPH3Q86UC2 560 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 NR1H4Q96RI1 486 aaPredicted RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 KIF9Q9HAQ2 790 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ZNF304Q9HCX3 659 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 MTUS2Q5JR59 1369 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ELL2O00472 640 aaPredicted RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 TMCC1O94876 653 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 STAMBPO95630 424 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 GFAPP14136 432 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 MAN1A1P33908 653 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 FXNQ16595 210 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 NLRP9Q7RTR0 991 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 NUF2Q9BZD4 464 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 RAD50Q92878 1312 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 FRMD3A2A2Y4 597 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ENO4A6NNW6 628 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ATP6V1G1O75348 118 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 MRPS35P82673 323 aaKnown RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 CETN1Q12798 172 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 NAALADL2Q58DX5 795 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 SCYL1Q96KG9 808 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 RETREG1Q9H6L5 497 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ATPIF1Q9UII2 106 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 SLC8A3P57103 927 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 TUBA4AP68366 448 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ANKRD1Q15327 319 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 METTL24Q5JXM2 366 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 NXNQ6DKJ4 435 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 GIMAP6Q6P9H5 292 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 FAM9CQ8IZT9 166 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 SYCP3Q8IZU3 236 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ARHGEF2Q92974 986 aaKnown RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 EFHD2Q96C19 240 aaPredicted RBP7.83□□□□□ -1.16
LIN7C-202ENST00000524596 CCSER2Q9H7U1 834 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 ARFGAP3Q9NP61 516 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 PDRG1Q9NUG6 133 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 TSC22D4Q9Y3Q8 395 aa7.83□□□□□ -1.16
LIN7C-202ENST00000524596 KTN1Q86UP2 1357 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 KRT18P05783 430 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 TRAPPC10P48553 1259 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 DDB1Q16531 1140 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 SMC1BQ8NDV3 1235 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 KLHDC4Q8TBB5 520 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 EZH1Q92800 747 aaPredicted RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 VCPKMTQ9H867 229 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 AATFQ9NY61 560 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 USO1O60763 962 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 KRT7P08729 469 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 NCBP1Q09161 790 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 THOC7Q6I9Y2 204 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 EXOC4Q96A65 974 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 PLEKHG4BQ96PX9 1271 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 BCL2L13Q9BXK5 485 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 AS3MTQ9HBK9 375 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 PRM3Q9NNZ6 103 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 ZMAT5Q9UDW3 170 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 TRIM66O15016 1216 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 TADA3O75528 432 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 MMEP08473 750 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 PSMA4P25789 261 aaKnown RBP7.82□□□□□ -1.16
LIN7C-202ENST00000524596 ZBTB41Q5SVQ8 909 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 CCDC122Q5T0U0 273 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 CDC37L1Q7L3B6 337 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 LRRC49Q8IUZ0 686 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 DCLK2Q8N568 766 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 ERO1AQ96HE7 468 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 TRIM5Q9C035 493 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 FAN1Q9Y2M0 1017 aa7.82□□□□□ -1.16
LIN7C-202ENST00000524596 PLEKHG3A1L390 1219 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 GCOM1H8Y6P7 765 aaPredicted RBP7.81□□□□□ -1.16
LIN7C-202ENST00000524596 OLR1P78380 273 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 MPP3Q13368 585 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 APLFQ8IW19 511 aaPredicted RBP7.81□□□□□ -1.16
LIN7C-202ENST00000524596 CDHR1Q96JP9 859 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 SMC6Q96SB8 1091 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 CCDC68Q9H2F9 335 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 PFDN4Q9NQP4 134 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.81□□□□□ -1.16
LIN7C-202ENST00000524596 A6NNZ2 444 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 TRPC1P48995 793 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 TUBB8Q3ZCM7 444 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 DPH6Q7L8W6 267 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 CLASRPQ8N2M8 674 aaKnown RBP7.81□□□□□ -1.16
LIN7C-202ENST00000524596 FAM129AQ9BZQ8 928 aa7.81□□□□□ -1.16
LIN7C-202ENST00000524596 TSGA10Q9BZW7 698 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms