RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 STK3Q13188 491 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 IMMTQ16891 758 aaKnown RBP30.68■■■□□ 2.5
COL13A1-214ENST00000522165 BRF1Q92994 677 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 GTF3C6Q969F1 213 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 LRRC2Q9BYS8 371 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 BSDC1Q9NW68 430 aaPredicted RBP30.68■■■□□ 2.5
COL13A1-214ENST00000522165 WWC3Q9ULE0 1092 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 BCAMP50895 628 aa30.67■■■□□ 2.5
COL13A1-214ENST00000522165 AGXT2Q9BYV1 514 aa30.67■■■□□ 2.5
COL13A1-214ENST00000522165 NBPF5PQ86XG9 351 aaPredicted RBP30.67■■■□□ 2.5
COL13A1-214ENST00000522165 C4BP0C0L5 1744 aa30.67■■■□□ 2.5
COL13A1-214ENST00000522165 PDIA4P13667 645 aaKnown RBP30.66■■■□□ 2.5
COL13A1-214ENST00000522165 NCLP19338 710 aaKnown RBP30.66■■■□□ 2.5
COL13A1-214ENST00000522165 FOXD4L6Q3SYB3 417 aaPredicted RBP30.66■■■□□ 2.5
COL13A1-214ENST00000522165 FOXD4L3Q6VB84 417 aaPredicted RBP30.66■■■□□ 2.5
COL13A1-214ENST00000522165 DOCK2Q92608 1830 aa30.66■■■□□ 2.5
COL13A1-214ENST00000522165 FGD1P98174 961 aa30.66■■■□□ 2.5
COL13A1-214ENST00000522165 BCL11BQ9C0K0 894 aaPredicted RBP30.66■■■□□ 2.5
COL13A1-214ENST00000522165 A0A1B0GUL6 1792 aa30.65■■■□□ 2.5
COL13A1-214ENST00000522165 TAF1P21675 1872 aa30.64■■■□□ 2.5
COL13A1-214ENST00000522165 ATP6V1DQ9Y5K8 247 aa30.64■■■□□ 2.5
COL13A1-214ENST00000522165 LARP1BQ659C4 914 aaKnown RBP30.64■■■□□ 2.5
COL13A1-214ENST00000522165 CAVIN1Q6NZI2 390 aaKnown RBP30.64■■■□□ 2.5
COL13A1-214ENST00000522165 PDCP20941 246 aa30.63■■■□□ 2.49
COL13A1-214ENST00000522165 HAND2P61296 217 aa30.63■■■□□ 2.49
COL13A1-214ENST00000522165 MAP3K12Q12852 859 aa30.63■■■□□ 2.49
COL13A1-214ENST00000522165 TPTE2Q6XPS3 522 aa30.63■■■□□ 2.49
COL13A1-214ENST00000522165 NLRP3Q96P20 1036 aa30.63■■■□□ 2.49
COL13A1-214ENST00000522165 QTRT2Q9H974 415 aaKnown RBP30.63■■■□□ 2.49
COL13A1-214ENST00000522165 CELF1Q92879 486 aaKnown RBP30.62■■■□□ 2.49
COL13A1-214ENST00000522165 MINPP1Q9UNW1 487 aa30.62■■■□□ 2.49
COL13A1-214ENST00000522165 C4AP0C0L4 1744 aa30.62■■■□□ 2.49
COL13A1-214ENST00000522165 MBD3O95983 291 aa30.62■■■□□ 2.49
COL13A1-214ENST00000522165 UBE4AQ14139 1066 aa30.62■■■□□ 2.49
COL13A1-214ENST00000522165 PFKFB2O60825 505 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 XRCC6P12956 609 aaKnown RBP eCLIP30.61■■■□□ 2.49
COL13A1-214ENST00000522165 GAS2L3Q86XJ1 694 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 FBXL16Q8N461 479 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 TMEM87AQ8NBN3 555 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 VPS37CA5D8V6 355 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-214ENST00000522165 RFC4P35249 363 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 TRAPPC3LQ5T215 181 aa30.61■■■□□ 2.49
COL13A1-214ENST00000522165 TCHHQ07283 1943 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 ZNF804BA4D1E1 1349 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 ZNF213O14771 459 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 MRE11P49959 708 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 FAM196AQ6ZSG2 479 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 USP48Q86UV5 1035 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 MAGEB6Q8N7X4 407 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 LRRC4BQ9NT99 713 aa30.6■■■□□ 2.49
COL13A1-214ENST00000522165 APOBRQ0VD83 1088 aa30.59■■■□□ 2.49
COL13A1-214ENST00000522165 SCRN1Q12765 414 aa30.59■■■□□ 2.49
COL13A1-214ENST00000522165 STRBPQ96SI9 672 aaKnown RBP30.59■■■□□ 2.49
COL13A1-214ENST00000522165 GDPD2Q9HCC8 539 aa30.59■■■□□ 2.49
COL13A1-214ENST00000522165 NSFL1CQ9UNZ2 370 aaKnown RBP30.59■■■□□ 2.49
COL13A1-214ENST00000522165 AIDAQ96BJ3 306 aa30.59■■■□□ 2.49
COL13A1-214ENST00000522165 CNPY2Q9Y2B0 182 aa30.59■■■□□ 2.49
COL13A1-214ENST00000522165 PHF14O94880 888 aa30.58■■■□□ 2.49
COL13A1-214ENST00000522165 CHST3Q7LGC8 479 aa30.58■■■□□ 2.49
COL13A1-214ENST00000522165 RPS8P62241 208 aaKnown RBP30.58■■■□□ 2.49
COL13A1-214ENST00000522165 ZSCAN23Q3MJ62 389 aa30.58■■■□□ 2.49
COL13A1-214ENST00000522165 MB21D2Q8IYB1 491 aaPredicted RBP30.58■■■□□ 2.49
COL13A1-214ENST00000522165 GRPEL1Q9HAV7 217 aa30.58■■■□□ 2.49
COL13A1-214ENST00000522165 JAK2O60674 1132 aa30.57■■■□□ 2.48
COL13A1-214ENST00000522165 ZNF445P59923 1031 aa30.57■■■□□ 2.48
COL13A1-214ENST00000522165 AEBP2Q6ZN18 517 aaPredicted RBP30.57■■■□□ 2.48
COL13A1-214ENST00000522165 LLPHQ9BRT6 129 aaKnown RBP30.57■■■□□ 2.48
COL13A1-214ENST00000522165 BRPF3Q9ULD4 1205 aa30.57■■■□□ 2.48
COL13A1-214ENST00000522165 WTIPA6NIX2 430 aaPredicted RBP30.56■■■□□ 2.48
COL13A1-214ENST00000522165 GYG1P46976 350 aa30.56■■■□□ 2.48
COL13A1-214ENST00000522165 CDC37L1Q7L3B6 337 aa30.56■■■□□ 2.48
COL13A1-214ENST00000522165 CCDC24Q8N4L8 307 aa30.56■■■□□ 2.48
COL13A1-214ENST00000522165 NCOA7Q8NI08 942 aa30.56■■■□□ 2.48
COL13A1-214ENST00000522165 ZNF274Q96GC6 653 aaPredicted RBP30.56■■■□□ 2.48
COL13A1-214ENST00000522165 NBPF3Q9H094 633 aa30.56■■■□□ 2.48
COL13A1-214ENST00000522165 GNL3LQ9NVN8 582 aaKnown RBP30.56■■■□□ 2.48
COL13A1-214ENST00000522165 RBM27Q9P2N5 1060 aaKnown RBP30.56■■■□□ 2.48
COL13A1-214ENST00000522165 APPP05067 770 aa30.55■■■□□ 2.48
COL13A1-214ENST00000522165 ALX1Q15699 326 aa30.55■■■□□ 2.48
COL13A1-214ENST00000522165 SMARCC2Q8TAQ2 1214 aa30.55■■■□□ 2.48
COL13A1-214ENST00000522165 MCM5P33992 734 aa30.54■■■□□ 2.48
COL13A1-214ENST00000522165 EVCP57679 992 aa30.54■■■□□ 2.48
COL13A1-214ENST00000522165 GADD45BO75293 160 aaPredicted RBP30.54■■■□□ 2.48
COL13A1-214ENST00000522165 ADRA2BP18089 450 aa30.54■■■□□ 2.48
COL13A1-214ENST00000522165 TMEM63CQ9P1W3 806 aa30.54■■■□□ 2.48
COL13A1-214ENST00000522165 ZMYM6O95789 1325 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 MBD4O95243 580 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 PDIA3P30101 505 aaKnown RBP30.53■■■□□ 2.48
COL13A1-214ENST00000522165 IQSEC3Q9UPP2 1182 aaPredicted RBP30.53■■■□□ 2.48
COL13A1-214ENST00000522165 CARMIL3Q8ND23 1372 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 WDR19Q8NEZ3 1342 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 PRC1O43663 620 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 TM4SF1P30408 202 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 CAVIN4Q5BKX8 364 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 RALYLQ86SE5 291 aaKnown RBP30.53■■■□□ 2.48
COL13A1-214ENST00000522165 LRP2BPQ9P2M1 347 aa30.53■■■□□ 2.48
COL13A1-214ENST00000522165 PATL2C9JE40 543 aaKnown RBP30.52■■■□□ 2.48
COL13A1-214ENST00000522165 DNM1Q05193 864 aaKnown RBP30.52■■■□□ 2.48
COL13A1-214ENST00000522165 NFIXQ14938 502 aa30.52■■■□□ 2.48
COL13A1-214ENST00000522165 ANTXR2P58335 489 aa30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms