RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
SPIDR-217ENST00000522117 CHMP4BP1P59074 171 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 ATP2B2Q01814 1243 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 TWISTNBQ3B726 338 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-217ENST00000522117 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 CEP57L1Q8IYX8 460 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 CCDC26Q8TAB7 109 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 MEIS3Q99687 375 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 BAG1Q99933 345 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-217ENST00000522117 THUMPD2Q9BTF0 503 aaKnown RBP13.82□□□□□ -0.2
SPIDR-217ENST00000522117 ACBD3Q9H3P7 528 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 PPP2R2CQ9Y2T4 447 aa13.82□□□□□ -0.2
SPIDR-217ENST00000522117 MYBL2P10244 700 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 SPTY2D1Q68D10 685 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-217ENST00000522117 SRGAP1Q7Z6B7 1085 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 C8orf58Q8NAV2 365 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 ATL2Q8NHH9 583 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-217ENST00000522117 LSG1Q9H089 658 aaKnown RBP13.81□□□□□ -0.2
SPIDR-217ENST00000522117 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 ZSCAN12O43309 604 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 RAD21O60216 631 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPIDR-217ENST00000522117 C1QTNF12Q5T7M4 302 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 SH3GL3Q99963 347 aa13.81□□□□□ -0.2
SPIDR-217ENST00000522117 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 CUTAO60888 179 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 FSBPO95073 299 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 VSNL1P62760 191 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 MBIPQ9NS73 344 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 NSD2O96028 1365 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 CAND2O75155 1236 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 ARMC2Q8NEN0 867 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 GOLPH3LQ9H4A5 285 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 RPGRIP1LQ68CZ1 1315 aa13.8□□□□□ -0.2
SPIDR-217ENST00000522117 IPO7O95373 1038 aaKnown RBP13.79□□□□□ -0.2
SPIDR-217ENST00000522117 ICA1Q05084 483 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 TMEM139Q8IV31 216 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 KAT14Q9H8E8 782 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 IRAK4Q9NWZ3 460 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 GIGYF1O75420 1035 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-217ENST00000522117 IRAK1P51617 712 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 IGSF22Q8N9C0 903 aa13.79□□□□□ -0.2
SPIDR-217ENST00000522117 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
SPIDR-217ENST00000522117 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-217ENST00000522117 TLDC1Q6P9B6 456 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
SPIDR-217ENST00000522117 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA6BA6NDN3 693 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 AP1G2O75843 785 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA8FQ08AF8 430 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA8DPQ0D2H9 430 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 EHD4Q9H223 541 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
SPIDR-217ENST00000522117 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
SPIDR-217ENST00000522117 HMMRO75330 724 aa13.77□□□□□ -0.2
SPIDR-217ENST00000522117 MYBPC2Q14324 1141 aa13.77□□□□□ -0.2
SPIDR-217ENST00000522117 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 ERCC4Q92889 916 aaPredicted RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 NAT10Q9H0A0 1025 aaKnown RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 NUCKS1Q9H1E3 243 aaKnown RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 SPATS2LQ9NUQ6 558 aaKnown RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.2
SPIDR-217ENST00000522117 PDCP20941 246 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 RWDD2BP57060 319 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 CEP112Q8N8E3 955 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.77□□□□□ -0.216e-7■■■■■ 229.9
SPIDR-217ENST00000522117 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 LRRC7Q96NW7 1537 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 ADGRB1O14514 1584 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 FRMD3A2A2Y4 597 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 SKAP2O75563 359 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 CCAR1Q8IX12 1150 aaKnown RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 PAIP2Q9BPZ3 127 aaKnown RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 VIPAS39Q9H9C1 493 aa13.77□□□□□ -0.21
SPIDR-217ENST00000522117 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
SPIDR-217ENST00000522117 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
SPIDR-217ENST00000522117 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-217ENST00000522117 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■■□ 22
SPIDR-217ENST00000522117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■□□ 16.7
SPIDR-217ENST00000522117 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
SPIDR-217ENST00000522117 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms