RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 VIL1P09327 827 aaKnown RBP7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 MX1P20591 662 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 RPS12P25398 132 aaKnown RBP7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 KLRK1P26718 216 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 GYG1P46976 350 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 BCAMP50895 628 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 TTC39AQ5SRH9 613 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 CIAPIN1Q6FI81 312 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 DPY19L2Q6NUT2 758 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 SLC51AQ86UW1 340 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 GPC2Q8N158 579 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 DPF2Q92785 391 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 CCDC8Q9H0W5 538 aaPredicted RBP7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 WWC3Q9ULE0 1092 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 MAST2Q6P0Q8 1798 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
IGHV4-55-201ENST00000520889 GLTPD2A6NH11 291 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 WTIPA6NIX2 430 aaPredicted RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 SNAP23O00161 211 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 APBB1O00213 710 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 GLRX3O76003 335 aaKnown RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 ADORA1P30542 326 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 PHKA1P46020 1223 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 CXCL9Q07325 125 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 TTF1Q15361 905 aaPredicted RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 TTLL5Q6EMB2 1281 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 L3MBTL3Q96JM7 780 aaPredicted RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 MYO5AQ9Y4I1 1855 aaKnown RBP7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 MAST3O60307 1309 aa7.77□□□□□ -1.17
IGHV4-55-201ENST00000520889 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 MCAMP43121 646 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 PDE1AP54750 535 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 RASGRF1Q13972 1273 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 DOK7Q18PE1 504 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 DACT2Q5SW24 774 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 B4GALNT3Q6L9W6 998 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 RSBN1LQ6PCB5 846 aaPredicted RBP7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 GPR101Q96P66 508 aaPredicted RBP7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 GMLQ99445 158 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 HAUS7Q99871 368 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 TLR7Q9NYK1 1049 aaKnown RBP7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 MYH2Q9UKX2 1941 aa7.76□□□□□ -1.17
IGHV4-55-201ENST00000520889 COL1A1P02452 1464 aaPredicted RBP7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 RFX7Q2KHR2 1363 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 PSMD14O00487 310 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 FRAT2O75474 233 aaPredicted RBP7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 GTF2IP78347 998 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 LRRFIP1Q32MZ4 808 aaKnown RBP7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 MFSD14BQ5SR56 506 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 PLEKHM2Q8IWE5 1019 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 SLF2Q8IX21 1173 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 PI4K2BQ8TCG2 481 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 HDAC9Q9UKV0 1011 aa7.75□□□□□ -1.17
IGHV4-55-201ENST00000520889 IQCA1LA6NCM1 817 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 MAP4K4O95819 1239 aaPredicted RBP7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 ZNF280AP59817 542 aaPredicted RBP7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 HHIPL2Q6UWX4 724 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 CERS3Q8IU89 383 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 C16orf71Q8IYS4 520 aaPredicted RBP7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 MTMR14Q8NCE2 650 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 FAM163AQ96GL9 167 aaPredicted RBP7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 PAG1Q9NWQ8 432 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 SERPINA10Q9UK55 444 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
IGHV4-55-201ENST00000520889 RAD17O75943 681 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 CYP2E1P05181 493 aaPredicted RBP7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 LDHBP07195 334 aaKnown RBP7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 LDHCP07864 332 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 ZFYP08048 801 aaPredicted RBP7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 USP17L8P0C7I0 530 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 PDE4AP27815 886 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 GSTO1P78417 241 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 MAP3K12Q12852 859 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 SCARF1Q14162 830 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 ZSCAN25Q6NSZ9 544 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 CERS5Q8N5B7 392 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 KBTBD3Q8NAB2 608 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 EVI5LQ96CN4 794 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 KCNQ5Q9NR82 932 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 GPRC5DQ9NZD1 345 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 FOCADQ5VW36 1801 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
IGHV4-55-201ENST00000520889 ADAMTSL1Q8N6G6 1762 aa7.72□□□□□ -1.17
IGHV4-55-201ENST00000520889 H7C1D1 291 aa7.72□□□□□ -1.17
IGHV4-55-201ENST00000520889 DDNO94850 711 aaPredicted RBP7.72□□□□□ -1.17
IGHV4-55-201ENST00000520889 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
IGHV4-55-201ENST00000520889 ZAP70P43403 619 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms