RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SLITRK4Q8IW52 837 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 TRMT44Q8IYL2 757 aaKnown RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 IFNL3Q8IZI9 196 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZSWIM2Q8NEG5 633 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 SNX29Q8TEQ0 813 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 L3MBTL2Q969R5 705 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 RHOVQ96L33 236 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 SLC4A5Q9BY07 1137 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 ASPSCR1Q9BZE9 553 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 SUV39H2Q9H5I1 410 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 KCNQ5Q9NR82 932 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 RAB6BQ9NRW1 208 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GOLGA6AQ9NYA3 693 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 CABP1Q9NZU7 370 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 TAGLN3Q9UI15 199 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 AKAP2Q9Y2D5 859 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 MRPS23Q9Y3D9 190 aaKnown RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 SCINQ9Y6U3 715 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 POTECB2RU33 542 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 GNRH1P01148 92 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 TRAPPC10P48553 1259 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 FCGRTP55899 365 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 EVX2Q03828 476 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 ITKQ08881 620 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 MORC3Q14149 939 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 TEAD4Q15561 434 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 MAPRE1Q15691 268 aaKnown RBP5□□□□□ -1.61
RNU4-60P-201ENST00000517239 AKAP4Q5JQC9 854 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 DMRTA1Q5VZB9 504 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 XKR5Q6UX68 686 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 VASH1Q7L8A9 365 aaPredicted RBP5□□□□□ -1.61
RNU4-60P-201ENST00000517239 GALNT12Q8IXK2 581 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 C3orf58Q8NDZ4 430 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 CEP63Q96MT8 703 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 NEUROD6Q96NK8 337 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 PTPRHQ9HD43 1115 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 LZTS1Q9Y250 596 aa5□□□□□ -1.61
RNU4-60P-201ENST00000517239 FNDC3AQ9Y2H6 1198 aaKnown RBP5□□□□□ -1.61
RNU4-60P-201ENST00000517239 HAX1O00165 279 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 LMNB2Q03252 620 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 TLR1Q15399 786 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 GFOD2Q3B7J2 385 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 L1TD1Q5T7N2 865 aaKnown RBP4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 ACBD5Q5T8D3 534 aaPredicted RBP4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 IL31Q6EBC2 164 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 CNNM4Q6P4Q7 775 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 POTEEQ6S8J3 1075 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 POTEAQ6S8J7 498 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 SV2BQ7L1I2 683 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 CYP2U1Q7Z449 544 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 RNF180Q86T96 592 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 PASD1Q8IV76 773 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZDHHC1Q8WTX9 485 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 HOOK2Q96ED9 719 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 MTMR8Q96EF0 704 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 XAGE2Q96GT9 111 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 YIPF4Q9BSR8 244 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 INO80BQ9C086 356 aaPredicted RBP4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 CCDC8Q9H0W5 538 aaPredicted RBP4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 SLC5A4Q9NY91 659 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 VPS9D1Q9Y2B5 631 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 USP20Q9Y2K6 914 aa4.99□□□□□ -1.61
RNU4-60P-201ENST00000517239 B2RBV5 119 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 ARHGAP33O14559 1287 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 EREGO14944 169 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 PRPF3O43395 683 aaKnown RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 MYL3P08590 195 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 NBPF7P0C2Y1 421 aaPredicted RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 CPEP16870 476 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 PPM1FP49593 454 aaPredicted RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 LIG3P49916 1009 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 NEK3P51956 506 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 HIRAP54198 1017 aaPredicted RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 PIN1Q13526 163 aaPredicted RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 CTC1Q2NKJ3 1217 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 TMEM95Q3KNT9 176 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 TMEM67Q5HYA8 995 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 FAM102BQ5T8I3 360 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 EFCAB2Q5VUJ9 269 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 POTEHQ6S545 545 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 FAM196AQ6ZSG2 479 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 DDX46Q7L014 1031 aaKnown RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 PODNQ7Z5L7 613 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 STRA8Q7Z7C7 330 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 TCEAL8Q8IYN2 117 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 SPICE1Q8N0Z3 855 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 CMTR1Q8N1G2 835 aaKnown RBP4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 OR6P1Q8NGX9 317 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 FBXO27Q8NI29 283 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 TRIM52Q96A61 297 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 RUNDC1Q96C34 613 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 CDH19Q9H159 772 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 EHD4Q9H223 541 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 ELP3Q9H9T3 547 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 USP25Q9UHP3 1055 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZNF180Q9UJW8 692 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 MAPRE3Q9UPY8 281 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 BCS1LQ9Y276 419 aa4.98□□□□□ -1.61
RNU4-60P-201ENST00000517239 ROBO2Q9HCK4 1378 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 CCDC163A0A0D9SF12 145 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms