RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 TNS3Q68CZ2 1445 aa17.16■□□□□ 0.34
DDR1-271ENST00000513240 PDCP20941 246 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 IFIT5Q13325 482 aaKnown RBP17.15■□□□□ 0.34
DDR1-271ENST00000513240 ARID5BQ14865 1188 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 TULP2O00295 520 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 ZMYM1Q5SVZ6 1142 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 ZBTB1Q9Y2K1 713 aa17.15■□□□□ 0.34
DDR1-271ENST00000513240 ITGA6P23229 1130 aa17.14■□□□□ 0.34
DDR1-271ENST00000513240 PDIA3P30101 505 aaKnown RBP17.14■□□□□ 0.34
DDR1-271ENST00000513240 ME1P48163 572 aa17.14■□□□□ 0.34
DDR1-271ENST00000513240 CCDC158Q5M9N0 1113 aa17.14■□□□□ 0.34
DDR1-271ENST00000513240 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.34
DDR1-271ENST00000513240 C16orf45Q96MC5 204 aaPredicted RBP17.14■□□□□ 0.34
DDR1-271ENST00000513240 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.34
DDR1-271ENST00000513240 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.34
DDR1-271ENST00000513240 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 BIN1O00499 593 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 FOXP2O15409 715 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 PTPN21Q16825 1174 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 KIF18AQ8NI77 898 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 TRIM5Q9C035 493 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 A0A1B0GVL5 298 aa17.14■□□□□ 0.33
DDR1-271ENST00000513240 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
DDR1-271ENST00000513240 KRT32Q14532 448 aa17.13■□□□□ 0.33
DDR1-271ENST00000513240 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
DDR1-271ENST00000513240 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
DDR1-271ENST00000513240 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
DDR1-271ENST00000513240 MCAMP43121 646 aa17.13■□□□□ 0.33
DDR1-271ENST00000513240 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
DDR1-271ENST00000513240 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
DDR1-271ENST00000513240 C11orf57Q6ZUT1 292 aaPredicted RBP17.12■□□□□ 0.33
DDR1-271ENST00000513240 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
DDR1-271ENST00000513240 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
DDR1-271ENST00000513240 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.12■□□□□ 0.33
DDR1-271ENST00000513240 V9GYY5 206 aaPredicted RBP17.12■□□□□ 0.33
DDR1-271ENST00000513240 TRPM3Q9HCF6 1732 aaPredicted RBP17.12■□□□□ 0.33
DDR1-271ENST00000513240 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
DDR1-271ENST00000513240 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
DDR1-271ENST00000513240 PHKA1P46020 1223 aa17.12■□□□□ 0.33
DDR1-271ENST00000513240 PRC1O43663 620 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 ADD1P35611 737 aaKnown RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 ZKSCAN3Q9BRR0 538 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 SEC31BQ9NQW1 1179 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 ILDR1Q86SU0 546 aaPredicted RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 PHKBQ93100 1093 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 GPAA1O43292 621 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 ZNF165P49910 485 aa17.11■□□□□ 0.33
DDR1-271ENST00000513240 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
DDR1-271ENST00000513240 IRS4O14654 1257 aaPredicted RBP17.1■□□□□ 0.33
DDR1-271ENST00000513240 PFKFB2O60825 505 aa17.1■□□□□ 0.33
DDR1-271ENST00000513240 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
DDR1-271ENST00000513240 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
DDR1-271ENST00000513240 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
DDR1-271ENST00000513240 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
DDR1-271ENST00000513240 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 CHRM1P11229 460 aaPredicted RBP17.09■□□□□ 0.33
DDR1-271ENST00000513240 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
DDR1-271ENST00000513240 FSIP1Q8NA03 581 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
DDR1-271ENST00000513240 USP54Q70EL1 1684 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 B4E1Z4 1266 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 MICU3Q86XE3 530 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 FAM200AQ8TCP9 573 aa17.08■□□□□ 0.33
DDR1-271ENST00000513240 PRKAB2O43741 272 aa17.08■□□□□ 0.32
DDR1-271ENST00000513240 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
DDR1-271ENST00000513240 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
DDR1-271ENST00000513240 ANTXR2P58335 489 aa17.08■□□□□ 0.32
DDR1-271ENST00000513240 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
DDR1-271ENST00000513240 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 NUTM2BA6NNL0 878 aaPredicted RBP17.07■□□□□ 0.32
DDR1-271ENST00000513240 NUTM2EB1AL46 878 aaPredicted RBP17.07■□□□□ 0.32
DDR1-271ENST00000513240 CPLX1O14810 134 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
DDR1-271ENST00000513240 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 SPECC1Q5M775 1068 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 FILIP1Q7Z7B0 1213 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 NUTM2AQ8IVF1 878 aaPredicted RBP17.07■□□□□ 0.32
DDR1-271ENST00000513240 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 CLSTN2Q9H4D0 955 aa17.07■□□□□ 0.32
DDR1-271ENST00000513240 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms