RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CCDC81Q6ZN84 652 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 CEP120Q8N960 986 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 MTMR8Q96EF0 704 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 PAWRQ96IZ0 340 aaKnown RBP7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 FBXO2Q9UK22 296 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 HCN4Q9Y3Q4 1203 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 FGD5Q6ZNL6 1462 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 KLRG2A4D1S0 409 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 NCAM1P13591 858 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 ILDR1Q86SU0 546 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 PNMA8AQ86V59 439 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 IPCEF1Q8WWN9 437 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 SCLT1Q96NL6 688 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 RHOBTB2Q9BYZ6 727 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 OSBPL7Q9BZF2 842 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 SH3GLB2Q9NR46 395 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 OBP2AQ9NY56 170 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 GTF2IRD1Q9UHL9 959 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 USP25Q9UHP3 1055 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 URB2Q14146 1524 aaKnown RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 USP31Q70CQ4 1352 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 TRIM64CA6NLI5 447 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 TRIM37O94972 964 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 STT3AP46977 705 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 GALEQ14376 348 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 EML3Q32P44 896 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 ERFEQ4G0M1 354 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 TM4SF20Q53R12 229 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 TMEM92Q6UXU6 159 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 TCEAL8Q8IYN2 117 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 ENAHQ8N8S7 591 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 OSBPL5Q9H0X9 879 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 MAGED1Q9Y5V3 778 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC11-209ENST00000512476 GTF2IP78347 998 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 C1QBPQ07021 282 aaKnown RBP7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 GRM1Q13255 1194 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 PUM3Q15397 648 aaKnown RBP7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 CHAC2Q8WUX2 184 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 SH3KBP1Q96B97 665 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 HVCN1Q96D96 273 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 SPON2Q9BUD6 331 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 ACAD8Q9UKU7 415 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 C6orf229H3BNL8 230 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 TRIM27P14373 513 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 GPATCH4Q5T3I0 446 aaKnown RBP7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 PJA1Q8NG27 643 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 TMEM106CQ9BVX2 250 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 AASDHPPTQ9NRN7 309 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 ZNF180Q9UJW8 692 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
TRAPPC11-209ENST00000512476 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 NBPF7P0C2Y1 421 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 C2orf27AQ580R0 203 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 CT47A1Q5JQC4 288 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 RC3H1Q5TC82 1133 aaKnown RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 KIAA1614Q5VZ46 1190 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 MMS22LQ6ZRQ5 1243 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 SLAIN1Q8ND83 568 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 OCSTAMPQ9BR26 566 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 PLCB1Q9NQ66 1216 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 ECEL1O95672 775 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 GTF2A2P52657 109 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 STK3Q13188 491 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 JAKMIP3Q5VZ66 844 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 USPL1Q5W0Q7 1092 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 EEPD1Q7L9B9 569 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 LMNTD2Q8IXW0 634 aa7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 STRBPQ96SI9 672 aaKnown RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 POLA1P09884 1462 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-209ENST00000512476 HTR3AP46098 478 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 ITKQ08881 620 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 AFAP1L2Q8N4X5 818 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 EAF1Q96JC9 268 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 SARGQ9BW04 601 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 KIF27Q86VH2 1401 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 C19orf81C9J6K1 198 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 PIK3CAP42336 1068 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 TCEA2Q15560 299 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 WDR45BQ5MNZ6 344 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 FAM180BQ6P0A1 224 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 ATXN2LQ8WWM7 1075 aaKnown RBP7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 TTC14Q96N46 770 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 XPO4Q9C0E2 1151 aaKnown RBP7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 SMC4Q9NTJ3 1288 aa7.54□□□□□ -1.2
TRAPPC11-209ENST00000512476 KIF21BO75037 1637 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms