RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 NCLP19338 710 aaKnown RBP20.91■□□□□ 0.94
SFXN1-208ENST00000507823 SLC9C2Q5TAH2 1124 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 ZNF274Q96GC6 653 aaPredicted RBP20.91■□□□□ 0.94
SFXN1-208ENST00000507823 PANK2Q9BZ23 570 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 RASGRF1Q13972 1273 aa20.9■□□□□ 0.94
SFXN1-208ENST00000507823 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
SFXN1-208ENST00000507823 CNPY2Q9Y2B0 182 aa20.9■□□□□ 0.94
SFXN1-208ENST00000507823 SCRN1Q12765 414 aa20.9■□□□□ 0.94
SFXN1-208ENST00000507823 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
SFXN1-208ENST00000507823 RBM27Q9P2N5 1060 aaKnown RBP20.9■□□□□ 0.94
SFXN1-208ENST00000507823 CHRNDQ07001 517 aa20.89■□□□□ 0.93
SFXN1-208ENST00000507823 ALX1Q15699 326 aa20.89■□□□□ 0.93
SFXN1-208ENST00000507823 GADD45BO75293 160 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-208ENST00000507823 CSPP1Q1MSJ5 1256 aa20.89■□□□□ 0.93
SFXN1-208ENST00000507823 MB21D2Q8IYB1 491 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-208ENST00000507823 GJD4Q96KN9 370 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-208ENST00000507823 ZNF804BA4D1E1 1349 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 ZNF532Q9HCE3 1301 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 UBE2HP62256 183 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 STK3Q13188 491 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 CDC37L1Q7L3B6 337 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 GDPD2Q9HCC8 539 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 BSDC1Q9NW68 430 aaPredicted RBP20.88■□□□□ 0.93
SFXN1-208ENST00000507823 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
SFXN1-208ENST00000507823 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
SFXN1-208ENST00000507823 SYAP1Q96A49 352 aaPredicted RBP20.87■□□□□ 0.93
SFXN1-208ENST00000507823 LRRC2Q9BYS8 371 aa20.87■□□□□ 0.93
SFXN1-208ENST00000507823 NYXQ9GZU5 481 aa20.87■□□□□ 0.93
SFXN1-208ENST00000507823 SALL1Q9NSC2 1324 aa20.87■□□□□ 0.93
SFXN1-208ENST00000507823 VPS37CA5D8V6 355 aaPredicted RBP20.87■□□□□ 0.93
SFXN1-208ENST00000507823 LRSAM1Q6UWE0 723 aa20.87■□□□□ 0.93
SFXN1-208ENST00000507823 IDH1O75874 414 aaKnown RBP20.86■□□□□ 0.93
SFXN1-208ENST00000507823 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
SFXN1-208ENST00000507823 STRBPQ96SI9 672 aaKnown RBP20.86■□□□□ 0.93
SFXN1-208ENST00000507823 C4AP0C0L4 1744 aa20.86■□□□□ 0.93
SFXN1-208ENST00000507823 C4BP0C0L5 1744 aa20.86■□□□□ 0.93
SFXN1-208ENST00000507823 JAK2O60674 1132 aa20.86■□□□□ 0.93
SFXN1-208ENST00000507823 KCNQ4P56696 695 aa20.86■□□□□ 0.93
SFXN1-208ENST00000507823 SNAP23O00161 211 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 CTDNEP1O95476 244 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 PDIA3P30101 505 aaKnown RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 DNM1Q05193 864 aaKnown RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 APOBRQ0VD83 1088 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 MAP3K12Q12852 859 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 UBE4AQ14139 1066 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 NBPF3Q9H094 633 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 CCNL1Q9UK58 526 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 ELP1O95163 1332 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 ZNF213O14771 459 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 ZBTB22O15209 634 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-208ENST00000507823 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
SFXN1-208ENST00000507823 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
SFXN1-208ENST00000507823 DTNBO60941 627 aa20.84■□□□□ 0.93
SFXN1-208ENST00000507823 MCM5P33992 734 aa20.84■□□□□ 0.93
SFXN1-208ENST00000507823 FGD1P98174 961 aa20.84■□□□□ 0.93
SFXN1-208ENST00000507823 BCAMP50895 628 aa20.84■□□□□ 0.93
SFXN1-208ENST00000507823 ANTXR2P58335 489 aa20.83■□□□□ 0.93
SFXN1-208ENST00000507823 TAF1P21675 1872 aa20.83■□□□□ 0.93
SFXN1-208ENST00000507823 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.92
SFXN1-208ENST00000507823 PNPLA7Q6ZV29 1317 aa20.83■□□□□ 0.92
SFXN1-208ENST00000507823 GNPATO15228 680 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 HAND2P61296 217 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 NAA16Q6N069 864 aaPredicted RBP20.82■□□□□ 0.92
SFXN1-208ENST00000507823 CERKQ8TCT0 537 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 KRT85P78386 507 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 RESTQ13127 1097 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 SETDB2Q96T68 719 aa20.82■□□□□ 0.92
SFXN1-208ENST00000507823 SRP68Q9UHB9 627 aaKnown RBP20.82■□□□□ 0.92
SFXN1-208ENST00000507823 PATL2C9JE40 543 aaKnown RBP20.81■□□□□ 0.92
SFXN1-208ENST00000507823 PRC1O43663 620 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 PHF14O94880 888 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 AFF2P51816 1311 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 FIBPO43427 364 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 MAGEB6Q8N7X4 407 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 KIF3AQ9Y496 699 aa20.81■□□□□ 0.92
SFXN1-208ENST00000507823 MYH15Q9Y2K3 1946 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 SYCE3A1L190 88 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 ZPR1O75312 459 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
SFXN1-208ENST00000507823 ARHGEF1Q92888 912 aaKnown RBP20.8■□□□□ 0.92
SFXN1-208ENST00000507823 AIDAQ96BJ3 306 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 RBSNQ9H1K0 784 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 ZSCAN16Q9H4T2 348 aaPredicted RBP20.8■□□□□ 0.92
SFXN1-208ENST00000507823 PTPDC1A2A3K4 754 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 CCDC183Q5T5S1 534 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 AMIGO3Q86WK7 504 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 TBC1D10CQ8IV04 446 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
SFXN1-208ENST00000507823 GNAT2P19087 354 aa20.79■□□□□ 0.92
SFXN1-208ENST00000507823 PPP1R9BQ96SB3 815 aa20.79■□□□□ 0.92
SFXN1-208ENST00000507823 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
SFXN1-208ENST00000507823 CHD4Q14839 1912 aa20.79■□□□□ 0.92
SFXN1-208ENST00000507823 PDS5AQ29RF7 1337 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms