RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 GSTO1P78417 241 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 NECTIN1Q15223 517 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 IMMTQ16891 758 aaKnown RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 DEFB132Q7Z7B7 95 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 SUPT20HQ8NEM7 779 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 TBC1D22AQ8WUA7 517 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 ZNF622Q969S3 477 aaKnown RBP eCLIP10.09□□□□□ -0.793e-7■□□□□ 11.1
SF3A1-210ENST00000498259 EDC3Q96F86 508 aaKnown RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 FAM84BQ96KN1 310 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 QSER1Q2KHR3 1735 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 RPAP1Q9BWH6 1393 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 LDHCP07864 332 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 GYG1P46976 350 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 SCARF1Q14162 830 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 SOGA3Q5TF21 947 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 DPP8Q6V1X1 898 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-210ENST00000498259 MPNDQ8N594 471 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 KCNB2Q92953 911 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 ANTXR1Q9H6X2 564 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-210ENST00000498259 RAI14Q9P0K7 980 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 ABCF2Q9UG63 623 aa10.08□□□□□ -0.8
SF3A1-210ENST00000498259 ARAP2Q8WZ64 1704 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 APPP05067 770 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 PDIA4P13667 645 aaKnown RBP10.07□□□□□ -0.8
SF3A1-210ENST00000498259 PDE6AP16499 860 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 TRDNQ13061 729 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 PRPF40BQ6NWY9 871 aaKnown RBP10.07□□□□□ -0.8
SF3A1-210ENST00000498259 ILDR1Q86SU0 546 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-210ENST00000498259 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 KIF2CQ99661 725 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 COA1Q9GZY4 146 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 CWC22Q9HCG8 908 aaKnown RBP10.07□□□□□ -0.8
SF3A1-210ENST00000498259 SUGT1Q9Y2Z0 365 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 MAST3O60307 1309 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
SF3A1-210ENST00000498259 ZNF213O14771 459 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 GPAA1O43292 621 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 BAG3O95817 575 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 HSPD1P10809 573 aaKnown RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 NT5C2P49902 561 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 TGFB2P61812 414 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 GPSM2P81274 684 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 PTH1RQ03431 593 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 BLOC1S2Q6QNY1 142 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 DZIP1Q86YF9 867 aaKnown RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 TDRD7Q8NHU6 1098 aaKnown RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 TBC1D16Q8TBP0 767 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 ZSCAN31Q96LW9 406 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 PIH1D3Q9NQM4 214 aaKnown RBP10.06□□□□□ -0.8
SF3A1-210ENST00000498259 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 NRXN2Q9P2S2 1712 aa10.06□□□□□ -0.8
SF3A1-210ENST00000498259 PATL2C9JE40 543 aaKnown RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 SLC27A2O14975 620 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 LDHBP07195 334 aaKnown RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 IL1R1P14778 569 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 CASTP20810 708 aaKnown RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 CYP7A1P22680 504 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 FGD1P98174 961 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 ALX1Q15699 326 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 AMOTL1Q8IY63 956 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 OSBP2Q969R2 916 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 JAKMIP1Q96N16 626 aaKnown RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 VPS33BQ9H267 617 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 ALDH8A1Q9H2A2 487 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-210ENST00000498259 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
SF3A1-210ENST00000498259 MAGEB6P1A0A0J9YX57 407 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 SNAP23O00161 211 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
SF3A1-210ENST00000498259 PCP11498 1178 aaKnown RBP10.04□□□□□ -0.8
SF3A1-210ENST00000498259 PLCG2P16885 1265 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-210ENST00000498259 GIMAP6Q6P9H5 292 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
SF3A1-210ENST00000498259 TTLL6Q8N841 843 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 NAPBQ9H115 298 aa10.04□□□□□ -0.8
SF3A1-210ENST00000498259 RNF41Q9H4P4 317 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms