RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, human

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA1-204	ENST00000494467	WASHC4	Q2M389	1173 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	TSHZ3	Q63HK5	1081 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	OLFM4	Q6UX06	510 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	NLGN2	Q8NFZ4	835 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	BACH2	Q9BYV9	841 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	SUGT1	Q9Y2Z0	365 aa		11.22	□□□□□ -0.61
ABCA1-204	ENST00000494467	C6orf229	H3BNL8	230 aa		11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	ZFY	P08048	801 aa	Predicted RBP	11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	CHML	P26374	656 aa		11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	ZAP70	P43403	619 aa		11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	ZGPAT	Q8N5A5	531 aa	Known RBP	11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	WDR66	Q8TBY9	1149 aa		11.21	□□□□□ -0.61
ABCA1-204	ENST00000494467	MYH2	Q9UKX2	1941 aa		11.21	□□□□□ -0.62
ABCA1-204	ENST00000494467	RAD50	Q92878	1312 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	UBE3C	Q15386	1083 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	TBC1D9	Q6ZT07	1266 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	VPS37D	Q86XT2	251 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	TBC1D22A	Q8WUA7	517 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	COL4A5	P29400	1685 aa		11.2	□□□□□ -0.62
ABCA1-204	ENST00000494467	FOCAD	Q5VW36	1801 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	TRIM6-TRIM34	B2RNG4	842 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	NFKBIE	O00221	500 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	GOLIM4	O00461	696 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	MMP14	P50281	582 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	ZSCAN25	Q6NSZ9	544 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	MRI	Q9BWK5	157 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	TAOK3	Q9H2K8	898 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	ANTXR1	Q9H6X2	564 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	CDK5RAP2	Q96SN8	1893 aa		11.19	□□□□□ -0.62
ABCA1-204	ENST00000494467	TCRBV5S4A2T	A0A5A2	114 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	ADD2	P35612	726 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	IARS	P41252	1262 aa	Known RBP	11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	ZMYM1	Q5SVZ6	1142 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	STRIP1	Q5VSL9	837 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	CASC1	Q6TDU7	716 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	PI16	Q6UXB8	463 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	RILPL2	Q969X0	211 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	FAM163A	Q96GL9	167 aa	Predicted RBP	11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	DNAJC2	Q99543	621 aa	Known RBP	11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	PIH1D3	Q9NQM4	214 aa	Known RBP	11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	HELLS	Q9NRZ9	838 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	BCS1L	Q9Y276	419 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	ECM29	Q5VYK3	1845 aa		11.18	□□□□□ -0.62
ABCA1-204	ENST00000494467	RNF113A	O15541	343 aa	Known RBP	11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	SGSM2	O43147	1006 aa		11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	MAP3K12	Q12852	859 aa		11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	RUFY2	Q8WXA3	655 aa		11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	EDC3	Q96F86	508 aa	Known RBP	11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	ESYT1	Q9BSJ8	1104 aa		11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	FSD1	Q9BTV5	496 aa		11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.17	□□□□□ -0.62
ABCA1-204	ENST00000494467	PPIP5K2	O43314	1243 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	ECE2	O60344	883 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	HDLBP	Q00341	1268 aa	Known RBP	11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	DACT2	Q5SW24	774 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	APPBP2	Q92624	585 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	IL17RA	Q96F46	866 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	GPR101	Q96P66	508 aa	Predicted RBP	11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	ZNRF3	Q9ULT6	936 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	NDUFB9	Q9Y6M9	179 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	LAMA4	Q16363	1823 aa		11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.16	□□□□□ -0.62
ABCA1-204	ENST00000494467	TIAM2	Q8IVF5	1701 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	MYO3B	Q8WXR4	1341 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	USP17L3	A6NCW0	530 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	USP17L4	A6NCW7	530 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	YDJC	A8MPS7	323 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	FZD9	O00144	591 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	MAP4K4	O95819	1239 aa	Predicted RBP	11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	VIL1	P09327	827 aa	Known RBP	11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	PDE6A	P16499	860 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	AOC3	Q16853	763 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	MCMDC2	Q4G0Z9	681 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	TTLL5	Q6EMB2	1281 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	ERICH6	Q7L0X2	663 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	USP17L1	Q7RTZ2	530 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	CERS3	Q8IU89	383 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	ZNF384	Q8TF68	577 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	NSUN4	Q96CB9	384 aa	Known RBP	11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	GML	Q99445	158 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	DIAPH3	Q9NSV4	1193 aa		11.15	□□□□□ -0.62
ABCA1-204	ENST00000494467	GAK	O14976	1311 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	MAST3	O60307	1309 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	RIMBP2	O15034	1052 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	FRAT2	O75474	233 aa	Predicted RBP	11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	REC8	O95072	547 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	PRELP	P51888	382 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	MFAP1	P55081	439 aa	Known RBP	11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	PPP4C	P60510	307 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	NMI	Q13287	307 aa	Predicted RBP	11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	SLC9C2	Q5TAH2	1124 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	KLHL34	Q8N239	644 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	LARGE2	Q8N3Y3	721 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	BCL11A	Q9H165	835 aa		11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.14	□□□□□ -0.63
ABCA1-204	ENST00000494467	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms