RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 KIAA2012Q0VF49 1180 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.57■■□□□ 1.36
USP39-218ENST00000493829 FBXW7Q969H0 707 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 ANTXR1Q9H6X2 564 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 LARGE2Q8N3Y3 721 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 COA1Q9GZY4 146 aa23.57■■□□□ 1.36
USP39-218ENST00000493829 ECE2O60344 883 aa23.56■■□□□ 1.36
USP39-218ENST00000493829 IARSP41252 1262 aaKnown RBP23.55■■□□□ 1.36
USP39-218ENST00000493829 TBC1D9Q6ZT07 1266 aa23.55■■□□□ 1.36
USP39-218ENST00000493829 CNTROBQ8N137 903 aa23.55■■□□□ 1.36
USP39-218ENST00000493829 TDRD7Q8NHU6 1098 aaKnown RBP23.55■■□□□ 1.36
USP39-218ENST00000493829 DENND2AQ9ULE3 1009 aa23.55■■□□□ 1.36
USP39-218ENST00000493829 CHD4Q14839 1912 aa23.54■■□□□ 1.36
USP39-218ENST00000493829 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
USP39-218ENST00000493829 IL1R1P14778 569 aa23.54■■□□□ 1.36
USP39-218ENST00000493829 GPR162Q16538 588 aa23.54■■□□□ 1.36
USP39-218ENST00000493829 FSD1Q9BTV5 496 aa23.54■■□□□ 1.36
USP39-218ENST00000493829 SEMA3EO15041 775 aa23.54■■□□□ 1.36
USP39-218ENST00000493829 PIH1D3Q9NQM4 214 aaKnown RBP23.54■■□□□ 1.36
USP39-218ENST00000493829 MYO5AQ9Y4I1 1855 aaKnown RBP23.53■■□□□ 1.36
USP39-218ENST00000493829 EVI5LQ96CN4 794 aa23.53■■□□□ 1.36
USP39-218ENST00000493829 PRELPP51888 382 aa23.52■■□□□ 1.36
USP39-218ENST00000493829 KCNQ5Q9NR82 932 aa23.52■■□□□ 1.36
USP39-218ENST00000493829 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
USP39-218ENST00000493829 SCN9AQ15858 1988 aa23.52■■□□□ 1.36
USP39-218ENST00000493829 GTF2IP78347 998 aa23.51■■□□□ 1.35
USP39-218ENST00000493829 NIM1KQ8IY84 436 aa23.51■■□□□ 1.35
USP39-218ENST00000493829 ABCF2Q9UG63 623 aa23.51■■□□□ 1.35
USP39-218ENST00000493829 CCDC88AQ3V6T2 1871 aa23.51■■□□□ 1.35
USP39-218ENST00000493829 DOCK2Q92608 1830 aa23.51■■□□□ 1.35
USP39-218ENST00000493829 YDJCA8MPS7 323 aa23.5■■□□□ 1.35
USP39-218ENST00000493829 IDH1O75874 414 aaKnown RBP23.5■■□□□ 1.35
USP39-218ENST00000493829 CHGBP05060 677 aa23.49■■□□□ 1.35
USP39-218ENST00000493829 MXD3Q9BW11 206 aa23.49■■□□□ 1.35
USP39-218ENST00000493829 PDS5AQ29RF7 1337 aaKnown RBP23.48■■□□□ 1.35
USP39-218ENST00000493829 TTF1Q15361 905 aaPredicted RBP23.48■■□□□ 1.35
USP39-218ENST00000493829 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 KBTBD3Q8NAB2 608 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 ZNF646O15015 1829 aaPredicted RBP23.48■■□□□ 1.35
USP39-218ENST00000493829 CDC45O75419 566 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 JDP2Q8WYK2 163 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 VPS33BQ9H267 617 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 LRP2BPQ9P2M1 347 aa23.48■■□□□ 1.35
USP39-218ENST00000493829 MYH7P12883 1935 aa23.47■■□□□ 1.35
USP39-218ENST00000493829 TTLL5Q6EMB2 1281 aa23.47■■□□□ 1.35
USP39-218ENST00000493829 RAI14Q9P0K7 980 aa23.47■■□□□ 1.35
USP39-218ENST00000493829 MAST2Q6P0Q8 1798 aa23.46■■□□□ 1.35
USP39-218ENST00000493829 TIAM2Q8IVF5 1701 aa23.46■■□□□ 1.35
USP39-218ENST00000493829 RAD17O75943 681 aa23.46■■□□□ 1.35
USP39-218ENST00000493829 MFSD14BQ5SR56 506 aa23.46■■□□□ 1.35
USP39-218ENST00000493829 WDR66Q8TBY9 1149 aa23.46■■□□□ 1.35
USP39-218ENST00000493829 FAM205AQ6ZU69 1335 aa23.45■■□□□ 1.35
USP39-218ENST00000493829 PRDX5P30044 214 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 GRIK5Q16478 980 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 DIAPH3Q9NSV4 1193 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 SBF1O95248 1867 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 PSME4Q14997 1843 aa23.45■■□□□ 1.34
USP39-218ENST00000493829 LMNB1P20700 586 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 UTRNP46939 3433 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 USP17L3A6NCW0 530 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 USP17L4A6NCW7 530 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 USP17L1Q7RTZ2 530 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 CERS5Q8N5B7 392 aa23.44■■□□□ 1.34
USP39-218ENST00000493829 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■■■□□ 14.8
USP39-218ENST00000493829 SALL1Q9NSC2 1324 aa23.43■■□□□ 1.34
USP39-218ENST00000493829 F8W031 263 aaPredicted RBP23.43■■□□□ 1.34
USP39-218ENST00000493829 C8orf34Q49A92 452 aa23.43■■□□□ 1.34
USP39-218ENST00000493829 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
USP39-218ENST00000493829 MAGEB6Q8N7X4 407 aa23.43■■□□□ 1.34
USP39-218ENST00000493829 RNF181Q9P0P0 153 aa23.43■■□□□ 1.34
USP39-218ENST00000493829 CHMLP26374 656 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 MAP3K12Q12852 859 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 NMIQ13287 307 aaPredicted RBP23.42■■□□□ 1.34
USP39-218ENST00000493829 SLC9C2Q5TAH2 1124 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 CWC27Q6UX04 472 aaKnown RBP23.42■■□□□ 1.34
USP39-218ENST00000493829 TBC1D22AQ8WUA7 517 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 FAM227BQ96M60 508 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 RFX7Q2KHR2 1363 aa23.42■■□□□ 1.34
USP39-218ENST00000493829 ZBTB22O15209 634 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 LDHBP07195 334 aaKnown RBP23.41■■□□□ 1.34
USP39-218ENST00000493829 PDE6AP16499 860 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 DACT2Q5SW24 774 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 STRIP1Q5VSL9 837 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 DZIP1Q86YF9 867 aaKnown RBP23.41■■□□□ 1.34
USP39-218ENST00000493829 ZGPATQ8N5A5 531 aaKnown RBP23.41■■□□□ 1.34
USP39-218ENST00000493829 DICER1Q9UPY3 1922 aaKnown RBP23.41■■□□□ 1.34
USP39-218ENST00000493829 ADAMTSL1Q8N6G6 1762 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 A0A0D9SFI3 127 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 PSMD14O00487 310 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 CASC1Q6TDU7 716 aa23.41■■□□□ 1.34
USP39-218ENST00000493829 ZNF532Q9HCE3 1301 aa23.4■■□□□ 1.34
USP39-218ENST00000493829 RNF113AO15541 343 aaKnown RBP23.4■■□□□ 1.34
USP39-218ENST00000493829 GRIN3BO60391 1043 aa23.4■■□□□ 1.34
USP39-218ENST00000493829 MECOMQ03112 1051 aa23.4■■□□□ 1.34
USP39-218ENST00000493829 CXCL9Q07325 125 aa23.4■■□□□ 1.34
USP39-218ENST00000493829 SPTY2D1Q68D10 685 aaPredicted RBP23.4■■□□□ 1.34
USP39-218ENST00000493829 ZNF541Q9H0D2 1346 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms