RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 IQSEC3Q9UPP2 1182 aaPredicted RBP16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 ZNF804AQ7Z570 1209 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 IL25Q9H293 177 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 POLLQ9UGP5 575 aa16.98■□□□□ 0.31
PDZRN3-210ENST00000492909 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 FRAT2O75474 233 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 GPR162Q16538 588 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 OLFM4Q6UX06 510 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 DPP8Q6V1X1 898 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 UTRNP46939 3433 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 ZBTB22O15209 634 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 DALRD3Q5D0E6 543 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-210ENST00000492909 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
PDZRN3-210ENST00000492909 EPB41L2O43491 1005 aaKnown RBP16.96■□□□□ 0.31
PDZRN3-210ENST00000492909 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
PDZRN3-210ENST00000492909 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-210ENST00000492909 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-210ENST00000492909 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
PDZRN3-210ENST00000492909 ZMYM1Q5SVZ6 1142 aa16.95■□□□□ 0.3
PDZRN3-210ENST00000492909 CC2D2BQ6DHV5 1058 aa16.95■□□□□ 0.3
PDZRN3-210ENST00000492909 HELLSQ9NRZ9 838 aa16.95■□□□□ 0.3
PDZRN3-210ENST00000492909 CHGBP05060 677 aa16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 SLC9C2Q5TAH2 1124 aa16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 TDRD7Q8NHU6 1098 aaKnown RBP16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 DAXXQ9UER7 740 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-210ENST00000492909 C21orf2O43822 256 aa16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 ADD2P35612 726 aa16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 EYA3Q99504 573 aa16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
PDZRN3-210ENST00000492909 MCCP23508 829 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 APPBP2Q92624 585 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 SEC62Q99442 399 aaKnown RBP16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 CCDC171Q6TFL3 1326 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 IL1R1P14778 569 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 PDE6AP16499 860 aa16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
PDZRN3-210ENST00000492909 MAST3O60307 1309 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 COA1Q9GZY4 146 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
PDZRN3-210ENST00000492909 CHD4Q14839 1912 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 PTH1RQ03431 593 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
PDZRN3-210ENST00000492909 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.3
PDZRN3-210ENST00000492909 RAI14Q9P0K7 980 aa16.89■□□□□ 0.3
PDZRN3-210ENST00000492909 SALL1Q9NSC2 1324 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 M0R2C6 588 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 SLC4A3P48751 1232 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 MAP4K1Q92918 833 aa16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-210ENST00000492909 G3V3G9 751 aa16.88■□□□□ 0.29
PDZRN3-210ENST00000492909 HSPA4P34932 840 aa16.88■□□□□ 0.29
PDZRN3-210ENST00000492909 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
PDZRN3-210ENST00000492909 SPTY2D1Q68D10 685 aaPredicted RBP16.88■□□□□ 0.29
PDZRN3-210ENST00000492909 JAG2Q9Y219 1238 aa16.88■□□□□ 0.29
PDZRN3-210ENST00000492909 IGSF3O75054 1194 aa16.87■□□□□ 0.29
PDZRN3-210ENST00000492909 KIF2CQ99661 725 aa16.87■□□□□ 0.29
PDZRN3-210ENST00000492909 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
PDZRN3-210ENST00000492909 ANAPC15P60006 121 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms