RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 CHL1O00533 1208 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 EIF6P56537 245 aaKnown RBP9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 UNC5CLQ8IV45 518 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 ARFGAP3Q9NP61 516 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 SAP30BPQ9UHR5 308 aaKnown RBP9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 KDM6BO15054 1643 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 CCDC152Q4G0S7 254 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 TXLNBQ8N3L3 684 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 INTS4Q96HW7 963 aaKnown RBP9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 VPS16Q9H269 839 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 MCM9Q9NXL9 1143 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 ABCC10Q5T3U5 1492 aa9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 YTHDC2Q9H6S0 1430 aaKnown RBP9.84□□□□□ -0.83
FNDC3A-204ENST00000492622 TRIM75PA6NK02 468 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 LRMPQ12912 555 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 TNNI3KQ59H18 835 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 SYCP3Q8IZU3 236 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 CRNKL1Q9BZJ0 848 aaKnown RBP9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 FPGT-TNNI3KV9GXZ4 949 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 NAPAP54920 295 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 UBXN1Q04323 297 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 CTDSPL2Q05D32 466 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 ME3Q16798 604 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 RAB34Q9BZG1 259 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 MAGEB6P1A0A0J9YX57 407 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 VPS18Q9P253 973 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 UHRF1BP1LA0JNW5 1464 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 KRT23Q9C075 422 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 TMEM110-MUSTN1A8MSY1 372 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 UQCRFS1P1P0C7P4 283 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 GJC1P36383 396 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 GPT2Q8TD30 523 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 KCNJ14Q9UNX9 436 aa9.83□□□□□ -0.84
FNDC3A-204ENST00000492622 RFC4P35249 363 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 ALS2CR12Q96Q35 445 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 PSMB7Q99436 277 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 FEZ1Q99689 392 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 CTAGE15A4D2H0 777 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 CTAGE8P0CG41 777 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 TNNI2P48788 182 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 CTAGE6Q86UF2 777 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 CTAGE4Q8IX94 777 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 LEO1Q8WVC0 666 aaPredicted RBP9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 CALCOCO1Q9P1Z2 691 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 KIAA0556O60303 1618 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 ZFYP08048 801 aaPredicted RBP9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 ELF2Q15723 593 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 MAGI2Q86UL8 1455 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 WWC2Q6AWC2 1192 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 PPP1R9BQ96SB3 815 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 MAGI3Q5TCQ9 1506 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 NSFL1CQ9UNZ2 370 aaKnown RBP9.82□□□□□ -0.84
FNDC3A-204ENST00000492622 A0A0D9SFI3 127 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 HINFPQ9BQA5 517 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 DDX21Q9NR30 783 aaKnown RBP eCLIP9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 POLR2DO15514 142 aaKnown RBP9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CALM1P0DP23 149 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CALM2P0DP24 149 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CALM3P0DP25 149 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 IFT81Q8WYA0 676 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CUL5Q93034 780 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CTNND2Q9UQB3 1225 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 BAG3O95817 575 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 KANK3Q6NY19 840 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 GDAP1L1Q96MZ0 367 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 ZBTB21Q9ULJ3 1066 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 COBLO75128 1261 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 CCDC175P0C221 793 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 ITGA6P23229 1130 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 XAGE2Q96GT9 111 aa9.81□□□□□ -0.84
FNDC3A-204ENST00000492622 GOLGA6L7A0A1B0GV03 622 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 ZEB2O60315 1214 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 CAPN2P17655 700 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 AMPD3Q01432 767 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 EEF2KMTQ96G04 330 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 USP44Q9H0E7 712 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 RAD50Q92878 1312 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 PTPRTO14522 1441 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 GPAA1O43292 621 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 NR1I2O75469 434 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 ZAP70P43403 619 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 RAD51AP2Q09MP3 1159 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
FNDC3A-204ENST00000492622 CTAGE9A4FU28 777 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms