RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MPNDQ8N594 471 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 LPIN2Q92539 896 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
NELFE-209ENST00000488426 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 PPIP5K2O43314 1243 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 FSTL1Q12841 308 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 RABEP1Q15276 862 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 DPP8Q6V1X1 898 aaPredicted RBP15.33■□□□□ 0.05
NELFE-209ENST00000488426 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 JDP2Q8WYK2 163 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 SNX21Q969T3 373 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.05
NELFE-209ENST00000488426 GPR101Q96P66 508 aaPredicted RBP15.33■□□□□ 0.05
NELFE-209ENST00000488426 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.05
NELFE-209ENST00000488426 IL25Q9H293 177 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.05
NELFE-209ENST00000488426 SLC5A1P13866 664 aa15.33■□□□□ 0.04
NELFE-209ENST00000488426 ANAPC15P60006 121 aa15.33■□□□□ 0.04
NELFE-209ENST00000488426 SMC1BQ8NDV3 1235 aa15.33■□□□□ 0.04
NELFE-209ENST00000488426 TBC1D2Q9BYX2 928 aa15.33■□□□□ 0.04
NELFE-209ENST00000488426 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
NELFE-209ENST00000488426 BSDC1Q9NW68 430 aaPredicted RBP15.33■□□□□ 0.04
NELFE-209ENST00000488426 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
NELFE-209ENST00000488426 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
NELFE-209ENST00000488426 RPS8P62241 208 aaKnown RBP15.32■□□□□ 0.04
NELFE-209ENST00000488426 GPSM2P81274 684 aa15.32■□□□□ 0.04
NELFE-209ENST00000488426 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
NELFE-209ENST00000488426 IL17RAQ96F46 866 aa15.32■□□□□ 0.04
NELFE-209ENST00000488426 EDC3Q96F86 508 aaKnown RBP15.32■□□□□ 0.04
NELFE-209ENST00000488426 DUOX1Q9NRD9 1551 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 APLP1P51693 650 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
NELFE-209ENST00000488426 POLLQ9UGP5 575 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
NELFE-209ENST00000488426 AKAP11Q9UKA4 1901 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 MED23Q9ULK4 1368 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 GOLIM4O00461 696 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 CHRNDQ07001 517 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
NELFE-209ENST00000488426 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 GPC2Q8N158 579 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
NELFE-209ENST00000488426 YDJCA8MPS7 323 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 EPS15P42566 896 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 SCNN1DP51172 638 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 CXCL9Q07325 125 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 HELBQ8NG08 1087 aaPredicted RBP15.3■□□□□ 0.04
NELFE-209ENST00000488426 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 MYH7P12883 1935 aa15.3■□□□□ 0.04
NELFE-209ENST00000488426 LTBP1Q14766 1721 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
NELFE-209ENST00000488426 HSPA4P34932 840 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 SLC4A3P48751 1232 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 EIF6P56537 245 aaKnown RBP15.29■□□□□ 0.04
NELFE-209ENST00000488426 KIAA2012Q0VF49 1180 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
NELFE-209ENST00000488426 NIM1KQ8IY84 436 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 TMX4Q9H1E5 349 aaPredicted RBP15.29■□□□□ 0.04
NELFE-209ENST00000488426 NDUFB9Q9Y6M9 179 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 RAD17O75943 681 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 EPHX2P34913 555 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 HACL1Q9UJ83 578 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 CCDC171Q6TFL3 1326 aa15.29■□□□□ 0.04
NELFE-209ENST00000488426 TAF5LO75529 589 aa15.28■□□□□ 0.04
NELFE-209ENST00000488426 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
NELFE-209ENST00000488426 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
NELFE-209ENST00000488426 SCN4AP35499 1836 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 SHTN1A0MZ66 631 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 IQCA1LA6NCM1 817 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 MCAMP43121 646 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 UBE4AQ14139 1066 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 SCARF1Q14162 830 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 MINPP1Q9UNW1 487 aa15.27■□□□□ 0.04
NELFE-209ENST00000488426 LRRC37AA6NMS7 1700 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 C6orf229H3BNL8 230 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.03
NELFE-209ENST00000488426 PHKA1P46020 1223 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 TTF1Q15361 905 aaPredicted RBP15.27■□□□□ 0.03
NELFE-209ENST00000488426 DOK7Q18PE1 504 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 MCMDC2Q4G0Z9 681 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 SUPT20HQ8NEM7 779 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 HELLSQ9NRZ9 838 aa15.27■□□□□ 0.03
NELFE-209ENST00000488426 ST18O60284 1047 aa15.26■□□□□ 0.03
NELFE-209ENST00000488426 ITGBL1O95965 494 aaPredicted RBP15.26■□□□□ 0.03
NELFE-209ENST00000488426 ZAP70P43403 619 aa15.26■□□□□ 0.03
NELFE-209ENST00000488426 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
NELFE-209ENST00000488426 WASHC4Q2M389 1173 aa15.26■□□□□ 0.03
NELFE-209ENST00000488426 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
NELFE-209ENST00000488426 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
NELFE-209ENST00000488426 MAP4K1Q92918 833 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 426.7 ms