RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 CCDC7Q96M83 1385 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 TET3O43151 1660 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 APLP1P51693 650 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 EMP3P54852 163 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 RALBP1Q15311 655 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 Q3C1V9 767 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 CCDC181Q5TID7 509 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 NXPE4Q6UWF7 544 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 SMAP1Q8IYB5 467 aaPredicted RBP3.94□□□□□ -1.78
RBM39-221ENST00000461283 FAM160A2Q8N612 972 aaPredicted RBP3.94□□□□□ -1.78
RBM39-221ENST00000461283 BAP1Q92560 729 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 KLRG1Q96E93 195 aa3.94□□□□□ -1.78
RBM39-221ENST00000461283 CHD2O14647 1828 aaKnown RBP3.94□□□□□ -1.78
RBM39-221ENST00000461283 DUOX2Q9NRD8 1548 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 FAM205CA6NFA0 338 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 TRIM37O94972 964 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 POLR3DP05423 398 aaPredicted RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 EIF4BP23588 611 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 GDF10P55107 478 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 RIPK4P57078 832 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 FAM160A1Q05DH4 1040 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MAP3K11Q16584 847 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 NBPF20Q3BBV1 942 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 NBPF14Q5TI25 921 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MEX3CQ5U5Q3 659 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 ALG1LQ6GMV1 187 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 FAM169BQ8N8A8 192 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 NUDT16Q96DE0 195 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 LRRIQ1Q96JM4 1722 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 GINM1Q9NU53 330 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 FOXD3Q9UJU5 478 aaPredicted RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 ZHX1Q9UKY1 873 aaPredicted RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 RALGAPBQ86X10 1494 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 ARHGAP35Q9NRY4 1499 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MBD5Q9P267 1494 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 EFCAB6Q5THR3 1501 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 POTEB3A0JP26 581 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 CCDC189A1A4V9 331 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 GOLGA6L3A6NEY3 463 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 ENPP3O14638 875 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 TLL1O43897 1013 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 IGFBP4P22692 258 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 NOS2P35228 1153 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 EPHA4P54764 986 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MLLT1Q03111 559 aaPredicted RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 FOXD4Q12950 439 aaPredicted RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 FAM98CQ17RN3 349 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 SYCP2LQ5T4T6 812 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 POTEBQ6S5H4 581 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 GJD3Q8N144 294 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MPNDQ8N594 471 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 JMYQ8N9B5 988 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 PRPF38AQ8NAV1 312 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
RBM39-221ENST00000461283 SPON2Q9BUD6 331 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 ETNK1Q9HBU6 452 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 TMPRSS4Q9NRS4 437 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 ADAMTS1Q9UHI8 967 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 PFDN2Q9UHV9 154 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 PPT2Q9UMR5 302 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 VPS9D1Q9Y2B5 631 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 TLR6Q9Y2C9 796 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 HCN4Q9Y3Q4 1203 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 GPSM3Q9Y4H4 160 aa3.93□□□□□ -1.78
RBM39-221ENST00000461283 MYOM3Q5VTT5 1437 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 ERBINQ96RT1 1412 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 PPP1R12AO14974 1030 aaPredicted RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 ACTN4O43707 911 aaKnown RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 SH3BP5O60239 455 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 PDGFAP04085 211 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 USP17L7P0C7H9 530 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 ZAP70P43403 619 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 RGS19P49795 217 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 COPS2P61201 443 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 SQSTM1Q13501 440 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 DGKZQ13574 1117 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 RAB33AQ14088 237 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 TSHZ1Q6ZSZ6 1077 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 SH3RF1Q7Z6J0 888 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 SLC9A9Q8IVB4 645 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 TEX2Q8IWB9 1127 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.92□□□□□ -1.78
RBM39-221ENST00000461283 ZFRQ96KR1 1074 aaKnown RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 CSRNP1Q96S65 589 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 UBP1Q9NZI7 540 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 ADGRB3O60242 1522 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 KANK1Q14678 1352 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 TMEM2Q9UHN6 1383 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 COL22A1Q8NFW1 1626 aaPredicted RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 KLF4O43474 513 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 FOXO3O43524 673 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 USP5P45974 858 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 KMT5BQ4FZB7 885 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 KIAA1211Q6ZU35 1233 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 ALKBH8Q96BT7 664 aaKnown RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 SLC10A4Q96EP9 437 aa3.92□□□□□ -1.78
RBM39-221ENST00000461283 C2orf49Q9BVC5 232 aaPredicted RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 CFDP1Q9UEE9 299 aaPredicted RBP3.92□□□□□ -1.78
RBM39-221ENST00000461283 CD2APQ9Y5K6 639 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms