RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ERC2O15083 957 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 ATP5JP18859 108 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 MCAMP43121 646 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 RGS3P49796 1198 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 SCARF1Q14162 830 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
UPF2-204ENST00000460569 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 ZNRF3Q9ULT6 936 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
UPF2-204ENST00000460569 AOX1Q06278 1338 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 MYH7P12883 1935 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 RAD17O75943 681 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
UPF2-204ENST00000460569 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
UPF2-204ENST00000460569 GTF2IP78347 998 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.41□□□□□ -0.42
UPF2-204ENST00000460569 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
UPF2-204ENST00000460569 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
UPF2-204ENST00000460569 PDS5AQ29RF7 1337 aaKnown RBP12.4□□□□□ -0.42
UPF2-204ENST00000460569 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 ZAP70P43403 619 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 SPATA5Q8NB90 893 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
UPF2-204ENST00000460569 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 FZD9O00144 591 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 PSMD14O00487 310 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 CXCL9Q07325 125 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 CIAPIN1Q6FI81 312 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 HAUS7Q99871 368 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
UPF2-204ENST00000460569 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
UPF2-204ENST00000460569 GOLIM4O00461 696 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 ZBTB22O15209 634 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
UPF2-204ENST00000460569 TNIP1Q15025 636 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 STRIP1Q5VSL9 837 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 EDC3Q96F86 508 aaKnown RBP12.38□□□□□ -0.43
UPF2-204ENST00000460569 MXD3Q9BW11 206 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
UPF2-204ENST00000460569 CYP2E1P05181 493 aaPredicted RBP12.37□□□□□ -0.43
UPF2-204ENST00000460569 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
UPF2-204ENST00000460569 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
UPF2-204ENST00000460569 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
UPF2-204ENST00000460569 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
UPF2-204ENST00000460569 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
UPF2-204ENST00000460569 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
UPF2-204ENST00000460569 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
UPF2-204ENST00000460569 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
UPF2-204ENST00000460569 FKBP1AP62942 108 aaKnown RBP12.36□□□□□ -0.43
UPF2-204ENST00000460569 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
UPF2-204ENST00000460569 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
UPF2-204ENST00000460569 CERS5Q8N5B7 392 aa12.36□□□□□ -0.43
UPF2-204ENST00000460569 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
UPF2-204ENST00000460569 PIH1D3Q9NQM4 214 aaKnown RBP12.36□□□□□ -0.43
UPF2-204ENST00000460569 LRP2BPQ9P2M1 347 aa12.36□□□□□ -0.43
UPF2-204ENST00000460569 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 IDH1O75874 414 aaKnown RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 LDHBP07195 334 aaKnown RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 VIL1P09327 827 aaKnown RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 GSPT1P15170 499 aaKnown RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 PRDX5P30044 214 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 GPC2Q8N158 579 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 RILPL2Q969X0 211 aa12.35□□□□□ -0.43
UPF2-204ENST00000460569 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
UPF2-204ENST00000460569 UTRNP46939 3433 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
UPF2-204ENST00000460569 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
UPF2-204ENST00000460569 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
UPF2-204ENST00000460569 GRIK5Q16478 980 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 DZIP1Q86YF9 867 aaKnown RBP12.34□□□□□ -0.43
UPF2-204ENST00000460569 KIAA0825Q8IV33 1275 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 EVI5LQ96CN4 794 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 SUGT1Q9Y2Z0 365 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 MAST3O60307 1309 aa12.34□□□□□ -0.43
UPF2-204ENST00000460569 MAP3K12Q12852 859 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms