RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 BICD2Q8TD16 824 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
SF1-211ENST00000448404 PRC1O43663 620 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 PRKAB2O43741 272 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 PDE8AO60658 829 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 PFKFB2O60825 505 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
SF1-211ENST00000448404 GOLGA6L4A6NEF3 574 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 PDCP20941 246 aa17.45■□□□□ 0.38
SF1-211ENST00000448404 NHSL1Q5SYE7 1610 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 KLF18A0A0U1RQI7 1052 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
SF1-211ENST00000448404 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
SF1-211ENST00000448404 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
SF1-211ENST00000448404 ZNF34Q8IZ26 560 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 APPBP2Q92624 585 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
SF1-211ENST00000448404 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
SF1-211ENST00000448404 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
SF1-211ENST00000448404 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 ADCY5O95622 1261 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
SF1-211ENST00000448404 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
SF1-211ENST00000448404 LUZP1Q86V48 1076 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 SPC24Q8NBT2 197 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
SF1-211ENST00000448404 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 ARMT1Q9H993 441 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 LAMA4Q16363 1823 aa17.43■□□□□ 0.38
SF1-211ENST00000448404 COL4A1P02462 1669 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 B4E1Z4 1266 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 PDE6AP16499 860 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
SF1-211ENST00000448404 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 ZNF213O14771 459 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 PHF14O94880 888 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 ADD2P35612 726 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 CDHR2Q9BYE9 1310 aa17.42■□□□□ 0.38
SF1-211ENST00000448404 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
SF1-211ENST00000448404 ADD1P35611 737 aaKnown RBP17.41■□□□□ 0.38
SF1-211ENST00000448404 JAG2Q9Y219 1238 aa17.41■□□□□ 0.38
SF1-211ENST00000448404 NUP62CLQ9H1M0 184 aa17.41■□□□□ 0.38
SF1-211ENST00000448404 HPS5Q9UPZ3 1129 aa17.41■□□□□ 0.38
SF1-211ENST00000448404 COL16A1Q07092 1604 aaPredicted RBP17.4■□□□□ 0.38
SF1-211ENST00000448404 GOLPH3LQ9H4A5 285 aa17.4■□□□□ 0.38
SF1-211ENST00000448404 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
SF1-211ENST00000448404 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
SF1-211ENST00000448404 PHKBQ93100 1093 aa17.4■□□□□ 0.38
SF1-211ENST00000448404 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
SF1-211ENST00000448404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.4■□□□□ 0.388e-9■□□□□ 10.7
SF1-211ENST00000448404 MBD4O95243 580 aa17.4■□□□□ 0.38
SF1-211ENST00000448404 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
SF1-211ENST00000448404 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
SF1-211ENST00000448404 CMTR1Q8N1G2 835 aaKnown RBP17.4■□□□□ 0.38
SF1-211ENST00000448404 NWD2Q9ULI1 1742 aa17.39■□□□□ 0.38
SF1-211ENST00000448404 NEDD4P46934 1319 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.37
SF1-211ENST00000448404 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
SF1-211ENST00000448404 LRP6O75581 1613 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
SF1-211ENST00000448404 GYG1P46976 350 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
SF1-211ENST00000448404 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
SF1-211ENST00000448404 AGXT2Q9BYV1 514 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 ABCF2Q9UG63 623 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
SF1-211ENST00000448404 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
SF1-211ENST00000448404 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
SF1-211ENST00000448404 NUP98P52948 1817 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 EVX2Q03828 476 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 TYRO3Q06418 890 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 SLC4A8Q2Y0W8 1093 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 ANO6Q4KMQ2 910 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
SF1-211ENST00000448404 DOT1LQ8TEK3 1739 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 KLRK1P26718 216 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms