RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MYL5Q02045 173 aa19.08■□□□□ 0.64
TCOF1-206ENST00000445265 SPAG1Q07617 926 aa19.08■□□□□ 0.64
TCOF1-206ENST00000445265 ANO1Q5XXA6 986 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 SEC63Q9UGP8 760 aaKnown RBP19.07■□□□□ 0.64
TCOF1-206ENST00000445265 ADCK5Q3MIX3 580 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 TRIM75PA6NK02 468 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 PDE4BQ07343 736 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 EDC3Q96F86 508 aaKnown RBP19.07■□□□□ 0.64
TCOF1-206ENST00000445265 CALCOCO1Q9P1Z2 691 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 N4BP3O15049 544 aa19.07■□□□□ 0.64
TCOF1-206ENST00000445265 CYP7A1P22680 504 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 ZNF444Q8N0Y2 327 aaPredicted RBP19.06■□□□□ 0.64
TCOF1-206ENST00000445265 CRACR2AQ9BSW2 395 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 NRXN1Q9ULB1 1477 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 ATP2B2Q01814 1243 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 TMEM87BQ96K49 555 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 NDUFB9Q9Y6M9 179 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 RMND1Q9NWS8 449 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 CTDP1Q9Y5B0 961 aaPredicted RBP19.06■□□□□ 0.64
TCOF1-206ENST00000445265 SSBP05455 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
TCOF1-206ENST00000445265 UBA7P41226 1012 aa19.06■□□□□ 0.64
TCOF1-206ENST00000445265 KRI1Q8N9T8 703 aaKnown RBP19.06■□□□□ 0.64
TCOF1-206ENST00000445265 ANGEL1Q9UNK9 670 aaKnown RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 POLR3GO15318 223 aaPredicted RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 GTPBP4Q9BZE4 634 aaKnown RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 ZHX3Q9H4I2 956 aa19.05■□□□□ 0.64
TCOF1-206ENST00000445265 TSPY2A6NKD2 308 aa19.05■□□□□ 0.64
TCOF1-206ENST00000445265 FGFR1OPO95684 399 aaKnown RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 RAB34Q9BZG1 259 aa19.05■□□□□ 0.64
TCOF1-206ENST00000445265 TMX1Q9H3N1 280 aa19.05■□□□□ 0.64
TCOF1-206ENST00000445265 IMPACTQ9P2X3 320 aa19.05■□□□□ 0.64
TCOF1-206ENST00000445265 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
TCOF1-206ENST00000445265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.05■□□□□ 0.645e-7■■■□□ 16.3
TCOF1-206ENST00000445265 PI4K2BQ8TCG2 481 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 XAGE2Q96GT9 111 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 IFIT1BQ5T764 474 aaKnown RBP19.04■□□□□ 0.64
TCOF1-206ENST00000445265 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
TCOF1-206ENST00000445265 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 E7EWF7 191 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 HAUS7Q99871 368 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 PFKFB2O60825 505 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 AFMP43652 599 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 HSP90AA4PQ58FG1 418 aa19.04■□□□□ 0.64
TCOF1-206ENST00000445265 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.04■□□□□ 0.64
TCOF1-206ENST00000445265 V9GYY5 206 aaPredicted RBP19.04■□□□□ 0.64
TCOF1-206ENST00000445265 SMAP1Q8IYB5 467 aaPredicted RBP19.03■□□□□ 0.64
TCOF1-206ENST00000445265 OGFRQ9NZT2 677 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 GPAA1O43292 621 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 TAF5LO75529 589 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 REREQ9P2R6 1566 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 H0YHG0 523 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 SYT10Q6XYQ8 523 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 CRNKL1Q9BZJ0 848 aaKnown RBP19.03■□□□□ 0.64
TCOF1-206ENST00000445265 KAT14Q9H8E8 782 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 ARFGAP3Q9NP61 516 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 ARHGEF40Q8TER5 1519 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 GOLGA6L10A6NI86 522 aa19.03■□□□□ 0.64
TCOF1-206ENST00000445265 USO1O60763 962 aaKnown RBP19.03■□□□□ 0.64
TCOF1-206ENST00000445265 ZNF594Q96JF6 807 aaPredicted RBP19.03■□□□□ 0.64
TCOF1-206ENST00000445265 RTL9Q8NET4 1388 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 CCDC175P0C221 793 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 TMEM87AQ8NBN3 555 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 FAM89AQ96GI7 184 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 NR1I2O75469 434 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 CALM1P0DP23 149 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 CALM2P0DP24 149 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 CALM3P0DP25 149 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 AMPD3Q01432 767 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 RILPL1Q5EBL4 403 aa19.02■□□□□ 0.64
TCOF1-206ENST00000445265 CT47A1Q5JQC4 288 aaPredicted RBP19.02■□□□□ 0.64
TCOF1-206ENST00000445265 RXRAP19793 462 aa19.02■□□□□ 0.63
TCOF1-206ENST00000445265 PROSER3Q2NL68 480 aa19.02■□□□□ 0.63
TCOF1-206ENST00000445265 PTPRMP28827 1452 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 NUTM2BA6NNL0 878 aaPredicted RBP19.01■□□□□ 0.63
TCOF1-206ENST00000445265 NUTM2EB1AL46 878 aaPredicted RBP19.01■□□□□ 0.63
TCOF1-206ENST00000445265 ZPR1O75312 459 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 ZNF202O95125 648 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 RRAGBQ5VZM2 374 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 NUTM2AQ8IVF1 878 aaPredicted RBP19.01■□□□□ 0.63
TCOF1-206ENST00000445265 MAGEB6Q8N7X4 407 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 FAM114A1Q8IWE2 563 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 TSG101Q99816 390 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 PHKG2P15735 406 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
TCOF1-206ENST00000445265 ADALQ6DHV7 355 aa19.01■□□□□ 0.63
TCOF1-206ENST00000445265 SPTY2D1Q68D10 685 aaPredicted RBP19■□□□□ 0.63
TCOF1-206ENST00000445265 OTUD7BQ6GQQ9 843 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
TCOF1-206ENST00000445265 DHX58Q96C10 678 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 A1BGP04217 495 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 FAM193AP78312 1265 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 ERBB4Q15303 1308 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 NSFL1CQ9UNZ2 370 aaKnown RBP19■□□□□ 0.63
TCOF1-206ENST00000445265 LDHCP07864 332 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 B4E1Z4 1266 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 NLRP12P59046 1061 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms